Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq230 181 1e-40 >seq230 Length=51241 Score = 181 bits (200), Expect = 1e-40 Identities = 1177/1864 (63%), Gaps = 82/1864 (4%) Strand=Plus/Plus Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467 || ||||| |||||||| ||||||||||| ||||| | ||| | ||||||||| | Sbjct 28020 CGGAGATAGTACATACCAGTTTTGAGACCTTTTTTCCAAGAGTAGAAATGCATTGATGTA 28079 Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACT--GATCGATGA 109525 ||||| | || || || | ||||| | || | ||| |||| |||| || | Sbjct 28080 AGTTTAGCAAAAGTTGGTTCAGCAATAAAAACATTGAA--ACTTTGACTTTGATCAATAA 28137 Query 109526 ATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCT 109585 | |||||||||||| ||||| || || | |||| ||||||||||| || || | Sbjct 28138 AAGCACCACGATCAGCAGCCATATCAATTAATGTTCTTTGTCTAATTTCCCAAACTGTTT 28197 Query 109586 TGTACAAATTCTTGAT-ATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCC 109644 |||| || ||||| | |||||| |||||| ||| ||||||| || |||| Sbjct 28198 TGTA-AAGTTCTTTAAGATCATCTGGAATGGATGGGATACTTTGAATTGAACCACGGTTG 28256 Query 109645 TTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACA 109704 || || ||| ||| | ||| ||||| | || | || ||||||| || | | Sbjct 28257 AGAACGATTTGATTCTTTAATTCTGGTGACCAAATTCCTAACTCCATGAGATCTTCGAGA 28316 Query 109705 AGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTC 109764 || || || ||||| | |||||||||||| | || || ||| |||||| | Sbjct 28317 AGTTGTTTATTGACAATAGTAAATTCACCAGCTAAAACACGACGACTGTAAATGTTACTG 28376 Query 109765 GTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATG 109824 || || ||||| || || || ||||| |||| ||||||| ||| || || || ||||| Sbjct 28377 GTATATGGTTCAAAGCATTCGTTGTTACCTAAAATTTGTGAAGTTGATGCAGTTGGCATT 28436 Query 109825 GGAGCCATGAGAAGACTGTTTCGGAGAC--CCTTCGTCTTTACCCGCTCACGCATTGCG- 109881 || || || | ||| ||| || |||| |||| | || || | | | ||| | Sbjct 28437 GGTGCTATTAAAAGTGAGTTACGAAGACCACCTT--TATTAACAATTTTA-TCTTTGAGA 28493 Query 109882 TC---CCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGT 109938 || ||| | ||||| || || | | ||| ||| | ||| ||| || Sbjct 28494 TCAGTCCAGTTCCAACGA-----TTTGTTGGTGT-AACATTCCAGAAATCGTATTGGAGA 28547 Query 109939 ACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAAC 109998 | ||| | || || ||||| || || | || || | || |||| | ||| Sbjct 28548 ATACCTTGGCTGGCTGGTGAACCTTTAAATGTTTCATATGGACCTTCAATAAGAGATAAC 28607 Query 109999 TCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAAT----ATGAGCATTCAT 110054 ||| ||| || || || ||| ||| ||||| || ||| ||| | | | Sbjct 28608 TCGTGTGATGCTGTAAGGGCAGCAAAATAAATAGTTTCTGCAATTTCAATGTTTAATTTT 28667 Query 110055 GAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACC 110114 | ||| || | || || || || | || | |||| || ||||| || ||||| Sbjct 28668 GCGGC-AG---CGGTACCATCAAATGGCATACGAAGTTGAATGAAAACATCAGCAAGACC 28723 Query 110115 CTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGG 110174 |||| ||| | |||||| || ||||| | | |||||| | || || || || Sbjct 28724 TTGAATACCAATACCAATTGGACGATGTCTTAAATTAGAGGTTTTGGCTTCTTGAACTGG 28783 Query 110175 GTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATG 110234 || |||| || || || | || |||||||| || ||| | || |||||||||| Sbjct 28784 ATAGTAGTTACGATCAATAATTTTGTTAAGATTCTTGGTAACAATTTTAGTGATTTCATA 28843 Query 110235 GAGTTTGTCGTAATCGAA--CGTTTTCGTCT------------CCTTATTGAC-----AT 110275 ||||| | | ||| || | ||||| | | |||| || | || Sbjct 28844 AAGTTTTTGATGATCAAATTCTTTTTCTTTTGGATTGGTTGAACCTTCTTTTCTACGAAT 28903 Query 110276 --ATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTA 110333 |||| || | ||||| || || ||||| || |||| | |||| ||| | ||||| Sbjct 28904 GAATTTTGGTAAGGCAATGGATGCGAGATTACATACAGCAATCTCATCTGGGGATGTGTA 28963 Query 110334 TTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGA 110393 || | |||||| ||||| | || || |||| ||| | ||||| ||||| || Sbjct 28964 TTGAATAATTTCGGTACAAAGATTACTGCTGCTAATAGTACCAAGATTCTTTTGATTGGA 29023 Query 110394 TTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTT 110453 ||| || || || | ||| |||||||| || |||| ||||||||||| || |||| Sbjct 29024 TTTAGAATTACAAGAATCTTTATAGAGAATAAATGGTGTACCAGTTTCAACTTGAGACTC 29083 Query 110454 GAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTT--GCGT-TAGCGAGACC---TTC 110507 | || || ||| | || || | || ||| |||| || || | Sbjct 29084 CATGATTGCAAACCAAAGTTCTTGAGC---TTTAATTACACGTCTAGCAAGGCCTGGTGT 29140 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTC-AAATTCCTGTCCGTACACATCAGAAAGACCCT 110566 | || || ||| || |||| | | | ||| | | || || ||||| Sbjct 29141 ATTTTCATATTTGAGATA-AAGTTCACGATGTTCTTCTGAGTGAGTTTCGTCAAGACGTG 29199 Query 110567 TCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACA 110626 || | || ||||| ||||| ||||||| ||| | || || || | |||||| | Sbjct 29200 GGGCTTCGTTAGGACAAAAGAGTGACCAATCTCCGTTTTGTTCTACTCTTTCCATGAAAA 29259 Query 110627 GGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGT 110686 | || | ||| | || | || || || | | | ||||| | ||| || | Sbjct 29260 GATCGCTGACCCAAAGAGCGTAAAAGAGATCTCTGGCTCTCATTTCTTCCTTACCATGAT 29319 Query 110687 TGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA 110746 | || || | ||| || | ||||| |||||||||||||||||||| || || | Sbjct 29320 TCTTTTTGAGTTCAATAAATTCAAAAATATCTGAGTGCCATGGTTCGAGATATACTGCAA 29379 Query 110747 TGGATCCCTTAC---GACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCC 110803 || || || | || ||| | || | ||||| || || || ||||||| || | Sbjct 29380 AGGCACCTTTTCTTTTACCACCACCTTGATCTACATAACGAGCAGTATCATTGAAAACAC 29439 Query 110804 TGAGCATAGGAATAATTCCAT--CGGATTGACCATTTGTACCCCTAATTCTGGACTT--A 110859 |||||| || | | |||| | | | ||||| ||||| | ||| |||| | Sbjct 29440 GGAGCATTGGTACCAAACCATTACTGGT--GCCATTGGTACCACGAAT--ATAACTTTGA 29495 Query 110860 TTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCA 110919 ||||||||| | ||| | ||||| |||||||| || | || |||| ||| Sbjct 29496 GCGGCACGAATCTTATGGCAAGCAATACCTATACCACCTGCAGATTTTGAAATTAAAGCA 29555 Query 110920 CACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979 || | | |||| ||| ||||||||||||| || ||||| | || | || || |||| Sbjct 29556 CATTGTTTGAGGGTATCATAAATACCATCGATTGAATCCTCTTTCATTTGAACTAAAAAG 29615 Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039 || || ||||| || || || || || |||||||| || || ||||| ||||| || Sbjct 29616 CATGAGGACATTTGTGGGTATGGTGTACCAGCATTGAAAAGAGTTGGTGTGGCATG--TG 29673 Query 111040 AACAGACCTTGGGAC--ATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGT 111097 | ||| || ||| | || | ||| || | ||| | | ||| ||||| | Sbjct 29674 TAAAGAGTTTTTGACTTAATTTCTCGTAGGTAAGAATTGCATTGTCGATATCGTTACCAT 29733 Query 111098 GAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTT--TCGATTAGCTTTCCAT 111154 ||||||| || | ||| ||||| | ||| | ||| || |||| |||| ||| | | Sbjct 29734 GAATACCGATAGAAACACGCATTAGCATGTGTTGTGGACGTTCAACGAT--GCTAT-TGT 29790 Query 111155 CAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAAT 111214 | ||| ||||| || |||| || |||| ||||||| | | ||||||||| Sbjct 29791 TGATACGATGAAGATATGAACGTTCTAATGTTTTGAAACCAAAGAAATCGTAATCGAAAT 29850 Query 111215 CACG 111218 |||| Sbjct 29851 CACG 29854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970117602200