Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq230 210 3e-49 seq317 120 4e-22 seq8 93.3 5e-14 seq409 91.5 2e-13 seq213 82.4 9e-11 >seq230 Length=51241 Score = 210 bits (232), Expect = 3e-49 Identities = 571/857 (67%), Gaps = 33/857 (4%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 |||||||||||||| || || ||||| |||| |||||| | ||| | |||||| || | Sbjct 28020 CGGAGATAGTACATACCAGTTTTGAGACCTTTTTTCCAAGAGTAGAAATGCATTGATGTA 28079 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 || || | | ||||| | || |||| ||| | ||||||||| || ||||| || Sbjct 28080 AGTTTAGCAAAAGTTGGTTCAGCAATAAAAACATTGAAACTTTGACTTTGATCAATAAAA 28139 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACA-TCCTTCATCTTGATTTCCCACACTGTGCG 105768 |||||| | || ||||||||||| | | ||| ||| |||||||| ||||| Sbjct 28140 GCACCACGATCAGCAGCCATATCAATTAATGTTCTTTGTCTA-ATTTCCCAAACTGTTTT 28198 Query 105769 GTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTT 105828 ||| || | || | ||||||||| || || |||| ||||||||||||| | || Sbjct 28199 GTAAAGTTCTTTAAGATCATCTGGAATGGATGGGATACTTTGAATTGAACCACGG---TT 28255 Query 105829 GACCATGA---GATCCTTCATATCCTTG-GACCAAAGACCAATCTTCTTGAGATCATTGA 105884 || | || ||| ||| | || || | ||||||| || | || | ||||||| | || Sbjct 28256 GAGAACGATTTGATTCTTTA-ATTCTGGTGACCAAATTCCTAACTCCATGAGATCTTCGA 28314 Query 105885 CGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCG 105944 || || || |||||||| ||| || || || | | | || ||||| Sbjct 28315 GAAGTTGTTTATTGACAATAGTAAATTCACCAGCTAAAACACGACGACTGTAAATGTTAC 28374 Query 105945 TCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCA 106004 | || || |||||||||||||| || ||||| || ||||||| || || || ||||||| Sbjct 28375 TGGTATATGGTTCAAAGCATTCGTTGTTACCTAAAATTTGTGAAGTTGATGCAGTTGGCA 28434 Query 106005 TTGGTGCCATCAAAAGACTGTTACGAAGAC--CCTTT-TCCTTGATGCGTTCCTTGAGAA 106061 ||||||| || ||||| ||||||||||| ||||| | || || |||||| Sbjct 28435 TTGGTGCTATTAAAAGTGAGTTACGAAGACCACCTTTATTAACAATTTTATCTTTGAGAT 28494 Query 106062 CATCCCAGT-----CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCAC 106116 || ||||| || | ||| ||||| | || || ||| | ||| |||| || | Sbjct 28495 CAGTCCAGTTCCAACG-ATTTG---TTGGTGTAACATT-CCAGAAATCGTATTGGAGAAT 28549 Query 106117 CCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC 106176 |||||| | || ||||| | |||||| ||||| | ||||| || || || Sbjct 28550 ACCTTGGCTGGCTGGTGAACCTTTAAATGTTTCATATGGACCTTCAATAAGAGATAACTC 28609 Query 106177 ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTC-AAAGATACGAGCATTCATCTCCT 106235 || |||| || ||| || ||||| | | | | || || | Sbjct 28610 GTGTGATGCTGTAAGGGCAGCAAAATAAATAGTTTCTGCAATTTCAATGTTTAAT----T 28665 Query 106236 TGGCTTCATCTG---AATCAAAT-GCGTAGCGGCACAAAATAAATACATCCGCGAGACCT 106291 | || || | | ||||||| || || || ||| || ||||| || |||||| Sbjct 28666 TTGCGGCAGCGGTACCATCAAATGGCATA-CGAAGTTGAATGAAAACATCAGCAAGACCT 28724 Query 106292 TGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGA 106351 |||| ||| | |||||| || | |||| | |||||| || || | ||| ||| Sbjct 28725 TGAATACCAATACCAATTGGACGATGTCTTAAATTAGAGGTTTTGGCTTCTTGAACTGGA 28784 Query 106352 TAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGA 106411 || | || | ||||| | | ||| ||||| ||||||||||| || |||||||||| | Sbjct 28785 TAGTAGTTACGATCAATAATTTTGTTAAGATTCTTGGTAACAATTTTAGTGATTTCATAA 28844 Query 106412 AGTTTTTCATAATCAAA 106428 ||||||| || |||||| Sbjct 28845 AGTTTTTGATGATCAAA 28861 Score = 109 bits (120), Expect = 6e-19 Identities = 443/685 (65%), Gaps = 25/685 (4%) Strand=Plus/Plus Query 106736 AGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTC 106795 |||| ||| || | || ||||| || || ||||| | || | || || | | | Sbjct 29193 AGACGTGGGGCTTCGTTAGGACAAAAGAGTGACCAATCTCCGTTTTGTTCTACTCTTTCC 29252 Query 106796 ATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCA 106855 |||||||| || | ||| || | ||||||||||||| | ||||| | | Sbjct 29253 ATGAAAAGATCGCTGACCCAAAGAGCGTAAAAGAGATCTCTGGCTCTCATTTCTTCCTTA 29312 Query 106856 CCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAG 106915 || || || | | |||| || || | ||||| | ||||||||| || ||||| Sbjct 29313 CCATGATTCTTTTTGAGTTCAATAAATTCAAAAATATCTGAGTGCCATGGTTCGAGATAT 29372 Query 106916 ACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 106972 ||||| | | || |||| || ||| |||||| |||||| || || || | || Sbjct 29373 ACTGCAAAGGCACCTTTTCTTTTACCACCACCTTGATCTACATAACGAGCAGTATCATTG 29432 Query 106973 AATACGCGAAGCATTGGAATAATACCAT--CTGATTGACCATTTGTCCCCCGAATACGAG 107030 || || || |||||||| | | ||||| ||| | ||||| || || |||||| | Sbjct 29433 AAAACACGGAGCATTGGTACCAAACCATTACTGGTG--CCATTGGTACCACGAATATAAC 29490 Query 107031 ATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTT 107090 || | ||| | | | |||| || || ||||| || || | ||||| ||| Sbjct 29491 TTTGAGCGGCACGAATCTTATGGCAAGCAATACCTATACCACCTGCAGATTTTGAAATTA 29550 Query 107091 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG-TTGGCGATA 107149 ||||| | | || || |||| ||||| | |||||| ||||| || || | || Sbjct 29551 AAGCACATTGTTTGAGGGTATCATAAATACCATCGATTGAATCCTCTTTCATTTGAACTA 29610 Query 107150 AGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCG 107209 | ||||| |||||| || || |||||||||||||||||| || |||||||| || Sbjct 29611 AA-AAGCATGAGGACATTTGTGGGTATGGTGTACCAGCATTGAAAAGAGTTGGTGTGGCA 29669 Query 107210 TGAATGAACATACCTTGGGAC--ATCTTGTCGTATGTCTCCAAGA----CAGAATCAATG 107263 || || | | | || ||| | || ||||| || |||| || || || Sbjct 29670 TG--TGTAAAGAGTTTTTGACTTAATTTCTCGTAGGT----AAGAATTGCATTGTCGATA 29723 Query 107264 TCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGG 107323 || | || || || ||||| | |||||||| | ||||| ||| || ||| | || | Sbjct 29724 TCGTTACCATGAATACCGATAGAAACACGCATTAGCATGTGTTGTGGACGTTCAACGATG 29783 Query 107324 ATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAA 107382 | | || || |||||||| | | | || | ||||||| ||||||| || | | Sbjct 29784 CTATTGTTGATACGATGAAGATATGAACGT-TCTAATGTTTTGAAACCAAAGAAATCGTA 29842 Query 107383 ATCATAGTCCCGCTTCGT-ATCAAT 107406 ||| | || || || || |||||| Sbjct 29843 ATCGAAATCACG-TTGGTAATCAAT 29866 >seq317 Length=37906 Score = 120 bits (132), Expect = 4e-22 Identities = 221/319 (69%), Gaps = 5/319 (2%) Strand=Plus/Minus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGC- 9337 |||||||||||| || || | ||| |||| ||| | ||| ||||| ||||| ||| Sbjct 22885 AAAACCATCCATTTCAACTAACAATTGATTAAGAGTATTTTCACGTTCGTCATTACCGCC 22826 Query 9338 TGGCATACCACCAGCACTGCGTTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACAA 9396 || | ||||| || | ||||| | ||| ||||||||| ||||||||||| |||| Sbjct 22825 TGAGAAGCCACCTTGACCTC-TTGCTCTACCAATGGCATCAATTTCATCAATGAAAACAA 22767 Query 9397 TACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACAC 9456 |||||||| ||| | | || | || || | ||| | ||| ||| | || |||| Sbjct 22766 TACATGGTGCATTCTTTCTAGCTAAATCGAATAAATCTCTAACTCTTGATGGACCAACAC 22707 Query 9457 CAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCAC 9516 |||||||||| || || || | || | || | | ||| || ||||| | ||||| Sbjct 22706 CAACAAACATTTCAACGAAATCTGAACCTGAGGTTGAAAAGAATGGTACATTTGCTTCAC 22647 Query 9517 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 9576 | ||| | ||| ||| | | ||| ||||| |||||||| ||| | || | |||| Sbjct 22646 CAGCAGTTGCTTTGGCAATTAAAGTTTTACCAGTACCTGGTGGACCAACAAGAATTGCAC 22587 Query 9577 CCCGTGGAATCTTGGCGCC 9595 | | |||||| || ||||| Sbjct 22586 CTCTTGGAATTTTAGCGCC 22568 >seq8 Length=179212 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 7176 GGTAACATAAACGCGGAGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGG 7235 ||||| || ||||| | | |||||||||||||| || || ||||| |||||||||||| Sbjct 147862 GGTAATATTAACGCTAAACGTGATTGGGGTCACGCCAAAGATTATGTCGAAGCCATGTGG 147921 Query 7236 CTCATGCTTCAACAAGAGGAAGCC-GACGAATATGTAGTAGCAACGGGTGAGACCCATTC 7294 | ||| | |||||||| ||||| | || | ||| | ||||| ||||| |||||||| Sbjct 147922 TTGATGTTACAACAAGA-TAAGCCACAAGATTTTGTTATTGCAACCGGTGAAACCCATTC 147980 Query 7295 AGT 7297 ||| Sbjct 147981 AGT 147983 >seq409 Length=27947 Score = 91.5 bits (100), Expect = 2e-13 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 9366 CCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCA 9425 || || |||||||| |||||||| || ||||||||||| || | || || || | Sbjct 7619 CCAACAGCATCAATTTCATCAATAAATACAATACATGGAGTGTTGGCACGAGCTTCTTTA 7678 Query 9426 AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9485 |||||||| | ||| ||| | || |||||||||||||| || ||||| | || || Sbjct 7679 AAGAGATCTCTAACTCTTGATGGACCAACACCAACAAACATTTCGACAAAATCTGAACCG 7738 Query 9486 GAACATTGGAT-GAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9544 | || | || ||| ||| | |||||| ||| ||||| ||| | | ||| || Sbjct 7739 CTA-ATAGTATAGAAATTAACACCTGCTTCACCAGCAGTGGCTTTGGCTAATAAAGTTTT 7797 Query 9545 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAAT 9586 ||| |||||||| ||| || | | ||||||| |||||| Sbjct 7798 ACCAGTACCTGGTGGACCTGCTAAAATGGCACCCTTTGGAAT 7839 >seq213 Length=53756 Score = 82.4 bits (90), Expect = 9e-11 Identities = 185/273 (68%), Gaps = 5/273 (2%) Strand=Plus/Minus Query 117286 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCC 117345 || ||||| ||||| || || || | ||| ||||| ||| || |||||||| | ||| Sbjct 48342 TGAAGACCTTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAAACCTGGCATTAAACCT 48283 Query 117346 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 117405 | |||||| ||||| ||||| || || || ||| ||||||||||| || Sbjct 48282 CTCTTCTTTAACCAGAAAATACTACAAAAACTACCACTGAAAAAGATACCCTCTACTGCG 48223 Query 117406 GCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGCC 117465 ||||| |||| | || || || || || ||| | | | || |||||| | |||| Sbjct 48222 GCAAATGCAACCAAACGTTCTGCAAA--AGAATCACTAT-TATTAATCCATTTTAATGCC 48166 Query 117466 CATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATA-ACTGCTTCTT 117524 || | || ||||| | ||||||||| | || | || || | ||||| | ||| || Sbjct 48165 CAATCAGCTTTCTTTTTAATACATGGAATGGTATCTATTGCGTTAAATAGTTTACTTTTT 48106 Query 117525 TTCAGATCCATCCTTAATGTATTTGTCAATCAA 117557 | | || ||| ||||| ||| | ||||| || Sbjct 48105 TGCTCAT-TATCTTTAATATATGTATCAATTAA 48074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589974907566760