Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq100 205 1e-47 >seq100 Length=81536 Score = 205 bits (226), Expect = 1e-47 Identities = 478/701 (68%), Gaps = 34/701 (5%) Strand=Plus/Minus Query 154442 TATGGTTCCACTTGGCAGTTGCACAATGAAATTAAATGCAGCAGCAGAACTAATGCCTGT 154501 |||| ||||| | |||||||||||||||||| | ||||| | | ||| | || || Sbjct 45948 TATGATTCCATTAGGCAGTTGCACAATGAAACTTAATGCTACCACCGAAATGTATCCAGT 45889 Query 154502 GTCATGGGAAGAGTTTG-CTAACGTGCATCCACATACACCTATGATA-CAGACCATGGGT 154559 |||||| ||| || || || | |||||| | ||| || | | || || | ||| Sbjct 45888 CTCATGGCCAGAATTCAACTCAC-TCCATCCATTTGTACC-ATCAGATCAAACTTTAGGT 45831 Query 154560 TATCAGAAAAT-TATAGATGACTTACAGAAATGGTTATGTGATATCACAGGGTTTGATTC 154618 || | |||| | || | | | || |||| | ||||| ||||| || || ||| Sbjct 45830 TACAAAGAAATGTTTAATTCAATCTCA-AAATCACTCTGTGAAATCACTGGTTTCGATGG 45772 Query 154619 TATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCA 154678 | ||||||||||| || || || || || ||||| |||||||| | | | || | Sbjct 45771 TTGTTCATTACAACCAAATGCTGGTTCCCAAGGTGAATATGCAGGTTTAATGGTTATTCG 45712 Query 154679 AGCATACCATCAAGGATCAGGAGATGATA---AAAGAAATGTATGTTTGATACCAG--AG 154733 |||| | || ||| | | | | |||||||||| ||||| || |||| || Sbjct 45711 TTCATAT--TTAATT-TCAATTGGTCAAAGTCAAAGAAATGTTTGTTTAATTCCAGTTAG 45655 Query 154734 TCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTC 154793 | || || || || ||||| || ||||||| |||| || ||||||||||||| |||| Sbjct 45654 T--GCCCACGGTACAAATCCAGCAAGTGCTGCTATGGTTGGTATGAAAGTTGTAGTTGTC 45597 Query 154794 AAGTGTGATGATGATGGTAACATAGACATCAAA--GATCT-AGAGAAGAAAGC----AAT 154846 | ||||||| | | |||||||| || ||||| ||||| |||| ||||| || Sbjct 45596 GATTGTGATGCTCAAGGTAACATTGA--TCAAAATGATCTCAGAGCC-AAAGCTGAAAAA 45540 Query 154847 CATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATT 154906 || || | | || | ||| | |||||||||| || ||||| || || ||||| || Sbjct 45539 TATAAAGATACTTTAGCTGC----TCTTATGATTACCTATCCATCAACTCACGGTGTCTT 45484 Query 154907 TGAAACTAACATTAGACAGATATGTAAGATC--GTTCATGACAATGGTGGTCAGGTATAT 154964 |||| || | | ||||||| ||| ||||| |||||||||| || || Sbjct 45483 TGAAG--AAGGTGCTAAGGATATGTGCGATATTGTTCACAGATATGGTGGTCAAGTTTAC 45426 Query 154965 CTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCA 155024 | ||||| |||||| | ||||| || || || || ||| |||| |||||| Sbjct 45425 ATGGATGGTGCAAATATGAATGCCCAAGTTGGTCTCTGTCGTCCAGGTGATATTGGTGCC 45366 Query 155025 GATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCT 155084 ||||| || ||||| || | || ||||||||||||||||||||||| ||||| ||||| Sbjct 45365 GATGTTTGCCATCTCAATCTTCACAAAACATTCTGTATTCCACATGGTGGTGGTGGTCCA 45306 Query 155085 GGCGTAGGTCCTATAGGTGTAGCAAAACATCTCACACCATT 155125 || | ||||| || |||| | |||| | ||||||| Sbjct 45305 GGTATGGGTCCAATCTGTGTTAAATCACATTTATCACCATT 45265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579207015112160