Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq100 199 5e-46 >seq100 Length=81536 Score = 199 bits (220), Expect = 5e-46 Identities = 479/702 (68%), Gaps = 36/702 (5%) Strand=Plus/Minus Query 159117 TATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACGCAGCATCAGAACTGATGCCTGT 159176 |||| ||||| | || ||||| || |||||||| || || | | ||| || || || Sbjct 45948 TATGATTCCATTAGGCAGTTGCACAATGAAACTTAATGCTACCACCGAAATGTATCCAGT 45889 Query 159177 GTCATGGGAAGAGTTTG-CTAACGTGCATCCACATACACCTATGATA-CAGACCATGGGT 159234 |||||| ||| || || || | |||||| | ||| || | | || || | ||| Sbjct 45888 CTCATGGCCAGAATTCAACTCAC-TCCATCCATTTGTACC-ATCAGATCAAACTTTAGGT 45831 Query 159235 TATCAAAAAAT-TATAGATGACTTACAGAAATGGTTATGTGATATCACAGGGTTTGATTC 159293 || || |||| | || | | | || |||| | ||||| ||||| || || ||| Sbjct 45830 TACAAAGAAATGTTTAATTCAATCTCA-AAATCACTCTGTGAAATCACTGGTTTCGATGG 45772 Query 159294 TATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCA 159353 | ||||||||||| || || || || || ||||| |||||||| | | | || | Sbjct 45771 TTGTTCATTACAACCAAATGCTGGTTCCCAAGGTGAATATGCAGGTTTAATGGTTATTCG 45712 Query 159354 AGCATACCATCAAGGATCAGGAGATGATA---AAAGAAATGTATGTTTGATACCAG--AG 159408 |||| | || ||| | | | | |||||||||| ||||| || |||| || Sbjct 45711 TTCATAT--TTAATT-TCAATTGGTCAAAGTCAAAGAAATGTTTGTTTAATTCCAGTTAG 45655 Query 159409 TCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTC 159468 | || || || || ||||| ||| || | |||| || ||||||||||||| |||| Sbjct 45654 T--GCCCACGGTACAAATCCAGCAAGTGCTGCTATGGTTGGTATGAAAGTTGTAGTTGTC 45597 Query 159469 AAGTGTGATGATGATGGCAACATAGACATCAAA--GATCT-AGAGAAGAAAGC----AAT 159521 | ||||||| | | || ||||| || ||||| ||||| |||| ||||| || Sbjct 45596 GATTGTGATGCTCAAGGTAACATTGA--TCAAAATGATCTCAGAGCC-AAAGCTGAAAAA 45540 Query 159522 CATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATT 159581 || || | | || | ||| | |||||||||| |||||||| || || ||||| || Sbjct 45539 TATAAAGATACTTTAGCTGC----TCTTATGATTACCTATCCATCAACTCACGGTGTCTT 45484 Query 159582 TGAAACAAACATCAGACAGATATGTAAGAT--TGTTCATGAGA-ATGGTGGTCAGGTATA 159638 |||| || | | ||||||| ||| |||||| ||| |||||||||| || || Sbjct 45483 TGAAG--AAGGTGCTAAGGATATGTGCGATATTGTTCAC-AGATATGGTGGTCAAGTTTA 45427 Query 159639 TCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGC 159698 | |||||||||||| | ||||| || || ||||| ||| |||| |||||| Sbjct 45426 CATGGATGGTGCAAATATGAATGCCCAAGTTGGTCTCTGTCGTCCAGGTGATATTGGTGC 45367 Query 159699 AGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCC 159758 ||||| || ||||| || | || || |||||||||||||||||||| ||||| ||||| Sbjct 45366 CGATGTTTGCCATCTCAATCTTCACAAAACATTCTGTATTCCACATGGTGGTGGTGGTCC 45307 Query 159759 TGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATT 159800 || | ||||| || |||| | |||| | ||||||| Sbjct 45306 AGGTATGGGTCCAATCTGTGTTAAATCACATTTATCACCATT 45265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588045326838640