Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq213 194 2e-44 >seq213 Length=53756 Score = 194 bits (214), Expect = 2e-44 Identities = 404/595 (68%), Gaps = 10/595 (2%) Strand=Plus/Minus Query 36880 CCATTTTTTG-ATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGAT 36938 ||| |||| | |||||| | ||| | ||||||||| ||||| |||| || || || Sbjct 48654 CCAGTTTTAGCATATTCGGCTACTTTACCTTCGAAAAAGTTTGTTTTTCTTTGGAGGGAA 48595 Query 36939 ATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCC 36998 || ||||||| ||||||| ||||| || | |||||| || | || | ||| Sbjct 48594 ATCATTTCCATCCAATCAAAAGGATTTGAAGCATTATAAATCTTTTTATAACCCAATGAG 48535 Query 36999 TTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCA 37058 || ||| | ||| ||| |||||| ||||||| | ||||| | || |||||| Sbjct 48534 ACCAAAAGACGATCAGCACAAAATTCAATGTATTGAGACATTGAACGACTATTCATACCA 48475 Query 37059 ATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTA 37118 |||| | |||||| | | || || |||| |||||| | || |||||| || Sbjct 48474 ATTAAATCTACTGGTAAAGAGTCACAAATAAATTCTTTTTCGCAAACAACGGCATCTCTA 48415 Query 37119 ACTATATTAACAATAACTTCTTCAGTTGGGGGATATTT--TAAATATTTAAACAATAAAC 37176 | || ||| | |||| || | | | ||| ||| | | | || | || Sbjct 48414 ATAATGGCTTCAAGAG--TCTTGGATTCGAGTTTGTTTATTAATTTGGTGTATAAAAGAC 48357 Query 37177 ATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATC 37236 ||||||||| ||||| | ||||||||| | | || ||||| || ||||||||||| | Sbjct 48356 ATGCAAAATTGCAATGAAGACCTTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAAAC 48297 Query 37237 CTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGAT-CCAGAAAAGAAA 37295 |||||||||||||||| || || | ||| || | | || ||||| | ||| || || Sbjct 48296 CTGGCATTAAACCTCTCTTCTTTAACCAGAA-AATACTACAAAAACTACCACTGAAAAAG 48238 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAA 37355 ||||| || ||||| |||||||| || | |||| | |||| ||||| || | Sbjct 48237 ATACCCTCTACTGCGGCAAATGCAACCAAACGTTCTGCAAAAGAATCACTATTAT---TA 48181 Query 37356 ATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTT 37415 ||||||||| || |||||| || || ||||| |||| ||| || || ||||| || Sbjct 48180 ATCCATTTTAATGCCCAATCAGCTTTCTTTTTAATACATGGAATGGTATCTATTGCGTTA 48121 Query 37416 AAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470 || || |||||| ||| ||||| | ||||| |||||||||| | ||||| Sbjct 48120 AATAGTTTACTTTTTTGCTCATTATCTTTAATATATGTATCAATTAAAAGACTAT 48066 Score = 170 bits (188), Expect = 2e-37 Identities = 216/295 (73%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533 |||||||||||||||||||||| || || || |||||||||||||| |||||||| | | Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 37534 ATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTG 37593 ||| || || | | || || | || | ||||| || || || |||||| ||| | Sbjct 47932 TTTGGACCTCACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCGG 47873 Query 37594 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGA-TAATTTTTTCC 37650 ||||||| || | ||||| |||||||| | ||| | || |||| | | ||| Sbjct 47872 CAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGTTGAGTTTACTACTCC 47813 Query 37651 AATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCAC 37710 |||| || | |||| || | ||||| ||| || | |||||||||||||| ||| Sbjct 47812 AATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGCTT 47753 Query 37711 GTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCTATC 37765 |||||||||| |||| ||||| | || ||||||||||| |||||||||||| Sbjct 47752 GTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCTATC 47698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592310884235960