Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq49 168 2e-36 seq179 107 4e-18 >seq49 Length=116333 Score = 168 bits (186), Expect = 2e-36 Identities = 331/485 (68%), Gaps = 11/485 (2%) Strand=Plus/Plus Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTTGATGATCTAATTCAGAT 150366 |||||||||| | |||||| | |||||| | || |||| || | | ||||| | | Sbjct 37429 AGAAGGTAAATTAGATCCAGTCATTGGTAGAGATGATGAAATTCGTCGTGTAATTAGGGT 37488 Query 150367 TCTTTCTCGTAAAACCAAAAAGAATGGTGCGTTAGTTGGTGAACCAGGTGTTGGTAAAAC 150426 | | || | | ||||||||| ||| | ||| ||||||||||||||||||||||||| Sbjct 37489 TTTATCAAGAAGAACCAAAAACAATCCAGTTTTAATTGGTGAACCAGGTGTTGGTAAAAC 37548 Query 150427 ACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTATGAA 150486 ||||||| || | || ||| | |||| | ||||||| |||||||| | | || Sbjct 37549 TGCTGTCGTTGAAGGTCTTGCTCAAAGAATCGTTCGTGGTGATATTCCAGATAATTTAAA 37608 Query 150487 AGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCGTGG 150546 | || || || ||||| |||||||||| || | ||||||| |||| |||||||| Sbjct 37609 TGCACGTG---TTATTGCTTTGGATATGGGTGCTTTAATTGCTGGTGCTAAATATCGTGG 37665 Query 150547 TGAATTCGAAGAACGTGTAGACAATTTGCTACAAGAACTAAAAGAACGCGATGATG---T 150603 ||| || ||||| | || | | || ||||| | ||||| ||| || | Sbjct 37666 TGACTTTGAAGAGAGATTAAAGGCAGTACTCAAAGAAGTTAAAGACTCTAATGGTGGTAT 37725 Query 150604 TATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGGCGGCGGTTC 150663 ||| | ||||| |||||||||||| | ||||||| ||| ||| | ||| | Sbjct 37726 TATCTTATTCATTGATGAAATCCATTTAGTCTTGGGTGCCGGTAAAACT---GATGGTGC 37782 Query 150664 TTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCG-TGTCATCG 150722 ||||| ||| | |||||||| | |||| |||||| || | ||| || | Sbjct 37783 CATGGATGCTGCAAATCTTTTAAAACCAATGTTGGCTCGTGGTGAACTTAGATGT-ATTG 37841 Query 150723 GTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGCACTACAGCGTC 150782 |||| || || ||||||||| ||| || | | |||||||| |||| | | |||| Sbjct 37842 GTGCCACTACTCTCGATGAATACCGTCAATATGTAGAAAAAGACCCAGCCTTTGAACGTC 37901 Query 150783 GTTTC 150787 ||||| Sbjct 37902 GTTTC 37906 >seq179 Length=62984 Score = 107 bits (118), Expect = 4e-18 Identities = 284/425 (67%), Gaps = 24/425 (6%) Strand=Plus/Minus Query 150359 ATTCAGATTCTTTCTCGTAAAACCAAAAAGAATGGTGCGTTAGTTGGTGAACCAGGTGTT 150418 ||||| | ||||| | | ||| ||||| ||| | ||| ||||||||||||||||| Sbjct 46981 ATTCAAGTACTTTCAAGAAGAACTAAAAACAATCCAGTATTAATTGGTGAACCAGGTGTT 46922 Query 150419 GGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGAT 150478 |||||||| ||| ||||| || ||||||||| | || | ||||||||||| |||||| Sbjct 46921 GGTAAAACTGCAATTGTTGAAGGTTTAGCACAAAGAATTGTAAATGGTGATGTACCAGAT 46862 Query 150479 TCTATGAAAGATGTTGAAATTCTTT---CTTTGAATATGGGTGCATTTACTGCTGGTACT 150535 ||| ||| | | || | | | | || || | | || || ||||||| | Sbjct 46861 AGTATCAAAAA---TAAACGTGTATTAGCATTAGATTTAGCATCAATTGTTGCTGGTGCC 46805 Query 150536 AAGTATCGTGGTGAATTCGAAGAACG--TGTAGACAATTTGCTACAAGA----ACTAA-- 150587 || | | | ||||| || ||||| || || | ||||| || |||| || | Sbjct 46804 AAATTTAGAGGTGACTTTGAAGAGCGTATGAAATCAATT--CTCAAAGATGTTGCTCATT 46747 Query 150588 AAGAACGCGATGATGTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTG 150647 || || || |||||| | ||||| |||||| ||||||| | | |||||||||| Sbjct 46746 TCAAAGGC---GAAGTTATTTTATTCATTGATGAACTCCATACATTGGTTGGTGCTGGTG 46690 Query 150648 CGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTG 150707 ||| | ||| | ||||| |||||||| ||||| | |||| |||| Sbjct 46689 ---CTGTTGAAGGTGGTATGGATGCTTCGAATATGTTGAAACCACAATTGGCTCGTGGTG 46633 Query 150708 AAATTCGTGTCATCGGTGCAACAACCTACGA-TGAATATCGTAAACACATTGAAAAAGAT 150766 | | | | |||||||||| | |||| | ||||| | ||| | |||||||| ||| Sbjct 46632 ATTTACATTGTGTCGGTGCAACCA-CTACAAGCGAATACAGAAAATATATTGAAAAGGAT 46574 Query 150767 GCAGC 150771 |||| Sbjct 46573 CCAGC 46569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147578651901902