Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq246 125 6e-24 seq242 118 9e-22 seq86 109 5e-19 seq7 96.9 3e-15 >seq246 Length=49296 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||||||||| ||||| |||||||||||||| ||| ||| ||| Sbjct 10811 ATGCAAATTTTTGTAAAAACCTTAACTGGTAAAACCATTACTTTAGAAGTCGAAGGTTCT 10752 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || |||||| || ||||| || | || ||||||| Sbjct 10751 GATACCATCGAAAATGTAAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 10692 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | || || ||||| || |||||||| |||||| | ||| | |||| || || Sbjct 10691 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTACAAT 10632 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||||||||||||| ||||| || | |||||||||||| |||| || Sbjct 10631 ATTCAAAAAGAATCAACTCTTCATTTAGTATTAAGATTAAGAGGTGG 10585 Score = 116 bits (128), Expect = 3e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 ||| |||||||| ||||||||||| | || || |||||||| ||| || ||| Sbjct 11271 AAACATGCAAATTTTTGTAAAAACCCTTACTGGCAAAACCATCACCTTAGAGGTCGAAGG 11212 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 ||| || || | | || | || |||||| || ||||| || | || ||| Sbjct 11211 TTCTGATACTATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATCCCACCAGA 11152 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 |||||| |||||||||||||| || |||||||| |||||| | ||| | |||| || Sbjct 11151 TCAACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTA 11092 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||||||||||||||| || || | || |||||| | || || || || Sbjct 11091 CAATATTCAAAAAGAATCTACCCTCCATTTAGTTTTAAGACTTCGTGGTGGTAT 11038 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||||||||| ||||| ||||| || || ||| ||| ||| ||| Sbjct 11039 ATGCAAATTTTTGTAAAAACCTTAACTGGTAAGACTATCACCTTAGAAGTCGAAGGTTCT 10980 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || |||||| |||||||| || | || ||||||| Sbjct 10979 GATACCATCGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 10920 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | || || ||||| || |||||||| |||||| | ||| | |||| ||||| Sbjct 10919 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTATAAT 10860 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||||||||| ||||| || | || |||||| | || || || || Sbjct 10859 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGACTTCGTGGTGGTAT 10810 >seq242 Length=49570 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | || ||||||||||||||| |||| ||| ||| Sbjct 4517 ATGCAAATTTTTGTTAAAACCCTTACTGGTAAAACCATTACCCTCGAAGTCGAAGGCTCA 4458 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | |||| |||||| || ||||| || | || ||||||| Sbjct 4457 GATACAATTGAAAACGTCAAAACCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 4398 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || |||||||| ||||| || |||||||| |||||| | ||| | | || ||||| Sbjct 4397 CAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATAAT 4338 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||||||||| ||||| || | || | |||||| |||| || || Sbjct 4337 ATCCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGGTAT 4288 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| ||||| |||||||||||||| ||| ||| ||| Sbjct 3833 ATGCAAATTTTCGTTAAAACTTTAACCGGTAAAACCATTACTTTAGAAGTTGAAGGCTCA 3774 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | || ||||| |||||||| || | || ||||||| Sbjct 3773 GATACTATTGAAAACGTTAAAACTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCAA 3714 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || |||||||| ||||| || |||||||| |||||| | ||| | | || || ||| Sbjct 3713 CAAAGACTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTACAAC 3654 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||||||||||||| ||||| || | || | |||||| |||| || Sbjct 3653 ATTCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGG 3607 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | || || || |||||||| ||| ||| || Sbjct 4745 ATGCAAATTTTTGTTAAAACTCTTACTGGCAAGACCATTACTTTAGAAGTAGAAGGCTCT 4686 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| |||||| || ||||| ||| | || ||||||| Sbjct 4685 GATACCATTGAAAATGTAAAGACCAAAATCCAAGATAAAGAAGGAATTCCACCAGATCAA 4626 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || |||||||| ||||| || |||||||| |||||| | ||| | | || || ||| Sbjct 4625 CAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAAC 4566 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||||||||| ||||| || | ||||||||| | || || || || Sbjct 4565 ATCCAAAAAGAATCAACTCTCCATTTAGTATTAAGACTCCGTGGTGGTAT 4516 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | || |||||||| || ||| ||| ||| ||| Sbjct 4289 ATGCAAATTTTTGTTAAAACTCTTACTGGTAAAACTATCACCTTAGAAGTTGAAGGCTCA 4230 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || |||||| || ||||| || | || ||||||| Sbjct 4229 GATACTATTGAAAATGTTAAAACTAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 4170 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | || || ||||| || |||||||| |||||| | ||| | | ||||| ||| Sbjct 4169 CAACGTCTCATTTTTGCAGGAAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 4110 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||||||||| ||||| || | || | |||||| |||| || || Sbjct 4109 ATTCAAAAAGAATCAACTCTCCATTTAGTCCTTAGATTAAGAGGTGGTAT 4060 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| ||||| |||||||| ||||| ||| ||| ||| Sbjct 4061 ATGCAAATTTTCGTCAAAACTTTAACCGGTAAAACTATTACTTTAGAAGTTGAAGGCTCA 4002 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || || || ||||| || | || ||||||| Sbjct 4001 GATACAATTGAAAATGTAAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 3942 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | | || ||||| || |||||||| |||||| | ||| | | || ||||| Sbjct 3941 CAACGTTTAATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTATAAT 3882 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||||||||| ||||| || | ||||||||| | || || || || Sbjct 3881 ATCCAAAAAGAATCAACTCTCCATTTAGTATTAAGACTTCGTGGTGGTAT 3832 >seq86 Length=87693 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | || ||||||||||| ||| |||| ||| |||| Sbjct 63296 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 63355 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || |||||| |||||||| || | || ||| ||| Sbjct 63356 GATACCATTGAAAATGTTAAAACCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 63415 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | ||||| || || || |||||||| |||||| | ||| | | ||||| || Sbjct 63416 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAT 63475 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||||||||| ||||| || | || | |||||| |||| || || Sbjct 63476 ATTCAAAAAGAATCAACTCTCCATTTAGTTCTTAGATTAAGAGGTGGTAT 63525 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | || ||||||||||| ||| |||| ||| ||| Sbjct 63752 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63811 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | |||| || || ||||| || || | || ||||||| Sbjct 63812 GATACCATTGAAAACGTCAAAACCAAGATTCAAGACAAGGAAGGTATCCCACCAGATCAA 63871 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | || || ||||| || |||||||| |||||| | ||| | | || |||||| Sbjct 63872 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATAAC 63931 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 |||||||||||||| ||||| || | || | |||||| |||| || Sbjct 63932 ATTCAAAAAGAATCAACTCTCCATTTAGTTCTCAGATTAAGAGGTGG 63978 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| | || ||||||||||| ||| |||| ||| ||| Sbjct 63068 ATGCAAATTTTCGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63127 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | |||| || || || ||||| || | || ||||||| Sbjct 63128 GATACCATCGAAAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 63187 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | || || ||||| || |||||||| |||||| | ||| | | || || ||| Sbjct 63188 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAAC 63247 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||||||||| ||||| || | || |||||| | || || || || Sbjct 63248 ATTCAAAAAGAATCAACTCTCCATTTAGTTTTAAGACTCCGTGGTGGTAT 63297 >seq7 Length=199231 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || |||||||| ||||| ||||| ||||| ||||||||||| ||| |||| ||| | Sbjct 42855 AATATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGT 42914 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 ||||| || | | || | || |||||| || ||||| || | || ||| Sbjct 42915 TCAGATACCATTGAAAATGTTAAAACCAAAATCCAAGATAAAGAAGGTATCCCACCAGAC 42974 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| | | || || || || |||||||| |||||| | ||| | | || || Sbjct 42975 CAACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTAC 43034 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| |||||||||||||| || || | || | ||||| |||| || || Sbjct 43035 AACATCCAAAAAGAATCTACCCTCCATTTAGTTCTCAGATTGAGAGGTGGTAT 43087 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||||||||| ||||||||||| ||| |||| ||| |||| Sbjct 43770 ATGCAAATTTTTGTCAAAACATTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 43829 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | || |||||| || ||||| || | || ||| ||| Sbjct 43830 GATACCATTGAAAACGTTAAAACTAAAATCCAAGATAAAGAAGGTATTCCACCAGACCAA 43889 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | | || || || || |||||||| |||||| | ||| | | || || ||| Sbjct 43890 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAAC 43949 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 || |||||||||||||| || || | || | ||||| |||| || Sbjct 43950 ATCCAAAAAGAATCTACCCTCCATTTAGTCCTCAGATTGAGAGGTGG 43996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425400657487821