Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq230 192 3e-44 >seq230 Length=51241 Score = 192 bits (212), Expect = 3e-44 Identities = 318/456 (70%), Gaps = 10/456 (2%) Strand=Plus/Plus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 |||||| | ||||| || ||| | ||||| || | ||| | ||| | || ||||| Sbjct 29225 CCAATCTCCGTTTTGTTCTACTCTTTCCATGAAAAGATCGCTGACCCAAAGAGCGTAAAA 29284 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | |||||| |||||||||||||| || || ||||||||||| || || | || ||||| Sbjct 29285 GAGATCTCTGGCTCTCATTTCTTCCTTACCATGATTCTTTTTGAGTTCAATAAATTCAAA 29344 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 ||||||||||||||||||||| | ||| | ||||| |||||||||||| || ||||| Sbjct 29345 AATATCTGAGTGCCATGGTTCGAGATATACTGCAAAGGCACCTTTTCTTTTACCACCACC 29404 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145 ||||||||| || | ||||| ||||||||||| | |||||| || || ||| | Sbjct 29405 TTGATCTACATAACGAGCAGTATCATTGAAAACACGGAGCATTGGTACCAAACCATTACT 29464 Query 26146 AAATCCGTTTGTGCTATGAAT----CTTGGATCCTGTCG-ATCTAATATCGTGAGCATGA 26200 || || || | | |||| ||| || | || |||| ||| | ||| | Sbjct 29465 GGTGCCATTGGTACCACGAATATAACTTTGAGCGGCACGAATCT--TATGGCAAGC---A 29519 Query 26201 ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATT 26260 ||||| || ||||| || |||||||||| ||||| | | | ||||| |||| Sbjct 29520 ATACCTATACCACCTGCAGATTTTGAAATTAAAGCACATTGTTTGAGGGTATCATAAATA 29579 Query 26261 CCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTT 26320 || | || ||| |||||||| | |||||| || || || | ||| | | | | Sbjct 29580 CCATCGATTGAATCCTCTTTCATTTGAACTAAAAAGCATGAGGACATTTGTGGGTATGGT 29639 Query 26321 GTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTA 26356 || || | ||| || | || ||||| ||||| ||| Sbjct 29640 GTACCAGCATTGAAAAGAGTTGGTGTGGCATGTGTA 29675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253037535943925