Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq100 219 5e-52 >seq100 Length=81536 Score = 219 bits (242), Expect = 5e-52 Identities = 483/704 (69%), Gaps = 40/704 (6%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 ||||||| | |||| | |||| || ||||| | || ||||| ||||| |||||| Sbjct 45265 AATGGTGATAAATGTGATTTAACACAGATTGGACCCATACCTGGACCACCACCACCATGT 45324 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 |||||||||||||| || || | ||| ||||| || ||||| |||||| |||| ||| Sbjct 45325 GGAATACAGAATGTTTTGTGAAGATTGAGATGGCAAACATCGGCACCAATATCACCTGGA 45384 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 ||||| || || ||||| | |||||||||||| | || || |||||||||| Sbjct 45385 CGACAGAGACCAACTTGGGCATTCATATTTGCACCATCCATGTAAACTTGACCACCATAT 45444 Query 138342 TCATGAAC--GATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATG 138399 ||||| ||| ||||||| | | || |||||| ||||| ||||| |||| Sbjct 45445 CTGTGAACAATATCGCACATATCCTTAGCACCTT--CTTCAAAGACACCGTGAGTTGATG 45502 Query 138400 GATATGTAATCATAATACATGAG-AGTTCAAATGTATTCATGATT----GCTTTCTTCTC 138454 |||| |||||||||| ||| || | || | | || || || ||||| ||| Sbjct 45503 GATAGGTAATCATAA-----GAGCAGCTAAAGTATCTTTATATTTTTCAGCTTT-GGCTC 45556 Query 138455 T-AGATC--TTTGATGTCTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCAT 138511 | ||||| ||||| || ||||| || | | ||||||| | |||| ||||||||||||| Sbjct 45557 TGAGATCATTTTGA--TCAATGTTACCTTGAGCATCACAATCGACAACTACAACTTTCAT 45614 Query 138512 TCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACT--CTGGTATCAGACAT 138569 || |||| | ||||| || ||||| || || || || ||| |||| || | ||| Sbjct 45615 ACCAACCATAGCAGCACTTGCTGGATTTGTACCGTGGGC--ACTAACTGGAATTAAACAA 45672 Query 138570 ACATTTCTTT---TATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCT 138626 |||||||||| | | | | ||| || | ||||| | || | | | ||| Sbjct 45673 ACATTTCTTTGACTTTGACCAATTGA-AATTAA--ATATGAACGAATAACCATTAAACCT 45729 Query 138627 GCATACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATA 138686 ||||| ||||| || || || || || ||||||||||| | ||| ||||| ||||| Sbjct 45730 GCATATTCACCTTGGGAACCAGCATTTGGTTGTAATGAACAACCATCGAAACCAGTGATT 45789 Query 138687 TCACATAACCATTTCTGTAAGT-CATCTATTATCTTTTGATAACCCATGGTCTG-TATCA 138744 ||||| | |||| || | | || | || | || ||||| | || || | | | Sbjct 45790 TCACAGAGTGATTT-TGAGATTGAATTAAACATTTCTTTGTAACCTAAAGTTTGATCTGA 45848 Query 138745 TAGGTGTATGTGGATGCA---CGTTGGCAAATTCTTCCCATGACACAGGCATCAGTTCTG 138801 | ||| | |||||| | |||| |||||| |||||| || || || ||| | Sbjct 45849 T-GGTACAAATGGATGGAGTGAGTTG---AATTCTGGCCATGAGACTGGATACATTTCGG 45904 Query 138802 CTGCTGCATTTAGTTTCATTGTGCAACTACCAAGTGGAACCATA 138845 | ||||| ||||||||||||||||| || | ||||| |||| Sbjct 45905 TGGTAGCATTAAGTTTCATTGTGCAACTGCCTAATGGAATCATA 45948 Score = 107 bits (118), Expect = 2e-18 Identities = 200/294 (68%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 || ||| ||| ||||| | ||||| | || |||||| || || || ||||||| Sbjct 46408 CCTTCTTGACCGTGATAGACAGCATACATAGCACTCATATTAGCAAGAAGAGCTTGTGAG 46467 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || || || || || ||||| || | | ||| || || ||||||||||| || || Sbjct 46468 GTACAAATATTTGAAGTAGCTTTTTCACGACGAATGTGTTGTTCTCTAGTTTGAAGGGCC 46527 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442 | | || || |||| |||| | || ||| ||| | |||||| || |||| Sbjct 46528 ATACGATAAGCTGGATCACCTTGTTTATCTTTTGAAACACCAATAATTCTACCTGGTAAA 46587 Query 139443 TTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATA 139502 | ||| || ||| | || |||||||| |||||||| ||||| ||| | || | Sbjct 46588 AGACGAGCATATTTATCTTTGGTGGCAAAGAAAGCAGCATGTGGACCACCGAAACCTAAT 46647 Query 139503 GGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCACCT 139556 |||| |||||| ||||| | |||||| ||| |||||| ||||| |||||| Sbjct 46648 GGAACACCAAATCTTTGACTGTTACCTAAAGCGATATCAGCACCCCATTCACCT 46701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578992617253480