Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq8 251 9e-62 >seq8 Length=179212 Score = 251 bits (278), Expect = 9e-62 Identities = 418/596 (70%), Gaps = 12/596 (2%) Strand=Plus/Minus Query 47752 GATTCCTCAACAAACTGACGGACAGAATATTGATTTC--CTGTGGCAATAACAAAATCAT 47809 |||| ||| ||||| | |||||| |||| | |||| | || |||||||||||||| | Sbjct 148004 GATTTCTCGACAAATTCACGGACTGAATG--GGTTTCACCGGTTGCAATAACAAAATCTT 147947 Query 47810 CAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCC 47869 || | |||||||| | ||| |||||||| || |||||||||||| |||| || |||| Sbjct 147946 GTGGCTTATCTTGTTGTAACATCAACCACATGGCTTCGACATAATCTTTGGCGTGACCCC 147887 Query 47870 AGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAG-ATT 47928 | ||||| || | || ||| || || || | | |||| ||| || || | | | Sbjct 147886 AATCACGTTTAGCGTTAATATTACCAAGGTAAAGAATTTCTTTCTTTCCA--AGTGCAAT 147829 Query 47929 GCTTTTAATGCT-CTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTC 47987 | || | | || ||||| | ||||||||| ||| ||| | | ||| || || Sbjct 147828 ACCGGCAACGAAACGAGTGATCTTTCTAGTTACAAAGGTTGGACCTCTACGTGGTGACTC 147769 Query 47988 ATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTAC 48047 |||||||| ||||||||| | || |||||||| || | |||||||||||| || Sbjct 147768 GTGATTAAAGAGAATACCATTGCATGCATACATATTATAAGCTTCACGATAGTTTACAAC 147709 Query 48048 TATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGT 48107 ||||| || | || |||| ||||| |||| |||||||||||||| || ||||| || Sbjct 147708 AATCCAATAGGCGTATTGTTTAGCAACTGCATATGGAGAACGTGGATAAAATGGTGTTGT 147649 Query 48108 CTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGAT 48167 |||| ||||| ||||||| || |||||||||||||| ||||| |||||||||| Sbjct 147648 TTCTGATTGTGGGATCTCTTGGACTTTACCATAAAGTTCTGATGTGGAGGCTTGATAGAA 147589 Query 48168 ACGAACCCTATCTTCCATCTCAAGCAA--ACGGACTGCCTCAAGCACTCTCAGGGTGCCT 48225 | |||| | |||| | || ||| ||| | ||| || | | | || | ||| Sbjct 147588 TCTAACCTTGCCTTCTAAACCA--CAACTACGAATTGCATCTAAAATACGAAGTGCGCCA 147531 Query 48226 ATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCTGT 48285 | |||| | ||| ||||| || | ||| ||||| || || || |||||||| ||| Sbjct 147530 AGACCATCAACATTACCTGTATATTCTGACATATCAAATGATACTTTGACATGACTTTGT 147471 Query 48286 GCCCCAAGATTATAAATCTCATCTGGTTGAACCTGCTGAATAACCCTCACTAAATT 48341 || || | ||||||||| || ||| | ||| | ||||| || | |||||| Sbjct 147470 GCACCTAAATTATAAATTTCTGTTGGGTTAACTTTGGAAATAATACTAAGTAAATT 147415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665487753374680