Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq230 244 1e-59 seq317 89.7 6e-13 seq213 82.4 9e-11 >seq230 Length=51241 Score = 244 bits (270), Expect = 1e-59 Identities = 1080/1676 (64%), Gaps = 78/1676 (5%) Strand=Plus/Minus Query 75311 CACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTC 75370 || || |||||||| || |||||||||||||||||| || || |||||| ||||| Sbjct 29671 CATGCCACACCAACTCTTTTCAATGCTGGTACACCATACCCACAAATGTCCTCATGCTTT 29612 Query 75371 CTTATCGCCAAC-AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGC 75429 ||| | || || ||||| |||||| | ||||| |||| || || | | ||||| Sbjct 29611 -TTAGTTCAAATGAAAGAGGATTCAATCGATGGTATTTATGATACCCTCAAACAATGTGC 29553 Query 75430 GCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAA 75489 ||| ||||| | || || ||||| || || |||| | | | ||| | | Sbjct 29552 TTTAATTTCAAAATCTGCAGGTGGTATAGGTATTGCTTGCCATAAGATTCGTGCCGCTCA 29493 Query 75490 ATCTCGTATTCGGGGGACAAATGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTA 75547 | | |||||| || || ||||| | ||| ||||| | | |||||||| || || Sbjct 29492 AAGTTATATTCGTGGTACCAATGGC--ACCAGTAATGGTTTGGTACCAATGCTCCGTGTT 29435 Query 75548 TTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCG 75604 || || | || || || |||||| |||||| || || | || || || | || Sbjct 29434 TTCAATGATACTGCTCGTTATGTAGATCAAGGTGGTGGTAAAAGAAAAGGTGCCTTTGCA 29375 Query 75605 GTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAA 75664 || || | ||||||||||| | ||||| | || || |||| | | || || Sbjct 29374 GTATATCTCGAACCATGGCACTCAGATATTTTTGAATTTATTGAACTCAAAAAGAATCAT 29315 Query 75665 GGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTC 75724 ||| | ||||| | ||||||||||||| | || ||| | || |||||| Sbjct 29314 GGTAAGGAAGAAATGAGAGCCAGAGATCTCTTTTACGCTCTTTGGGTCAGCGATCTTTTC 29255 Query 75725 ATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGT 75784 ||| | | || || | || | ||||| || || ||||| || | || ||| || Sbjct 29254 ATGGAAAGAGTAGAACAAAACGGAGATTGGTCACTCTTTTGTCCTAACGAAGCCCCACGT 29195 Query 75785 CTCTCCGA--CGCGGTGGGT-GAGGAGTTTGAAGCCCTCTA-CACAAAGTATGAAGAGGA 75840 || ||| | | | | || | |||| || || | |||| |||||| | | Sbjct 29194 CTTGACGAAACTCACTCAGAAGAACATCGTGAA---CTTTATCTCAAA-TATGAAAAT-A 29140 Query 75841 GGGTAGAGCCAATGC--GAC-TGTACC---AGCCGCCGATGTTTGGAAGGCTATTCTCAA 75894 || ||| ||| ||| |||| ||| || ||||| || || | | Sbjct 29139 CACCAG-GCCT-TGCTAGACGTGTAATTAAAGCTCAAGAACTTTGGTTTGCAATCATGGA 29082 Query 75895 ATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAG 75954 || || || ||||| ||||||| ||| || || || ||| ||||||| || Sbjct 29081 GTCTCAAGTTGAAACTGGTACACCATTTATTCTCTATAAAGATTCTTGTAATTCTAAATC 29022 Query 75955 TAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTA 76014 || ||||||||| | || || || | ||| |||||||| || |||||| | | || Sbjct 29021 CAATCAAAAGAATCTTGGTACTATTAGCAGCAGTAATCTTTGTACCGAAATTATTCAATA 28962 Query 76015 CACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGT--AT 76072 |||| ||||||| ||||| || ||| | ||||| || ||| | ||||| | || Sbjct 28961 CACATCCCCAGATGAGATTGCTGTATGTAATCTCGCATCCATTGCCTTACCAAAATTCAT 28902 Query 76073 --GTC--AATGAAGAGACTCGCACT---------------TTTGATTATGAAAAACTTCA 76113 || || |||| | || | |||||| || |||||||| | Sbjct 28901 TCGTAGAAAAGAAGGTTCAACCAATCCAAAAGAAAAAGAATTTGATCATCAAAAACTTTA 28842 Query 76114 TGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCC 76173 ||||||||| || ||||||||||| ||||| ||| | | ||||| | || | ||||| Sbjct 28841 TGAAATCACTAAAATTGTTACCAAGAATCTTAACAAAATTATTGATCGTAACTACTATCC 28782 Query 76174 CGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGG 76233 ||| | || || |||||| | |||| | || |||||| | ||| ||||||| Sbjct 28781 AGTTCAAGAAGCCAAAACCTCTAATTTAAGACATCGTCCAATTGGTATTGGTATTCAAGG 28722 Query 76234 TCTCGCGGATGTATTTATTTTGTGCCGCTACGC-ATTTGATT---CAGATGAAGCCAAGG 76289 ||| || ||||| || ||| || || || ||||||| | | || || || Sbjct 28721 TCTTGCTGATGTTTTCATTCAACTTCG-TATGCCATTTGATGGTACCGCTGCCGCAAA-- 28665 Query 76290 AGATGAATGCTCGTATCTTT-GAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348 || || | | | | ||||| || ||| || |||| || || Sbjct 28664 --ATTAAACATTGAAATTGCAGAAACTATTTATTTTGCTGCCCTTACAGCATCACACGAG 28607 Query 76349 TTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTG 76408 || || ||||| | ||||| |||||| | ||||| || || |||||| | Sbjct 28606 TTATCTCTTATTGAAGGTCCATATGAAACATTTAAAGGTTCACCAGCCAGCCAAGGTATT 28547 Query 76409 CTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG-----ACTGGGATGTTC 76463 || || | ||| | ||| || || | ||||| ||| | || ||||| || || Sbjct 28546 CTCCAATACGATTTCTGG-AATGTTACACCAA---CAAAT-CGTTGGAACTGGACTGATC 28492 Query 76464 TCAAGGAACGCATCAAGGAGAAGGGT---CTTCGTAACAGTCTTTTGATGGCACCAATGC 76520 |||| || || | || ||| ||||||||| ||||| || |||||||||| Sbjct 28491 TCAAAGATAAAATTGTTAATAAAGGTGGTCTTCGTAACTCACTTTTAATAGCACCAATGC 28432 Query 76521 CAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAA 76580 |||| || || || ||||||| || ||||| || ||||||||||||||||| || | | Sbjct 28431 CAACTGCATCAACTTCACAAATTTTAGGTAACAACGAATGCTTTGAACCATATACCAGTA 28372 Query 76581 ACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCA 76640 |||| ||| | | | || ||||| ||| |||||||| || || || || Sbjct 28371 ACATTTACAGTCGTCGTGTTTTAGCTGGTGAATTTACTATTGTCAATAAACAACTTCTCG 28312 Query 76641 ATGACCTCAAGAAGATTGGTCTCTGGTC-CAAGGATATGAAGGATCTCATGGT--GAAAG 76697 | || |||| | || | || | ||||| | || || | ||| ||| || || || Sbjct 28311 AAGATCTCATGGAGTTAGGAATTTGGTCACCAGAAT-TAAAGAATCAAATCGTTCTCAAC 28253 Query 76698 CGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCA 76757 | ||||||| ||||||| |||| || || ||||||||| | || | || ||| | Sbjct 28252 C--GTGGTTCAATTCAAAGTATCCCATCCATTCCAGATGATCTTAAAGAACTTTACAAAA 28195 Query 76758 CAGTGTGGGAAATCA-AGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTC 76816 |||| |||||||| | | | || || | ||||| ||||| || ||||||||| || Sbjct 28194 CAGTTTGGGAAATTAGACAAAGAACAT-TAATTGATATGGCTGCTGATCGTGGTGCTTTT 28136 Query 76817 ATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCT 76876 |||||||||||||||||| | ||| | || || | ||||| | | || || | Sbjct 28135 ATTGATCAAAGTCAAAGTTTCAATGTTTTTATTGCTGAACCAACTTTTGCTAAACTTACA 28076 Query 76877 TCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 || |||||| | ||| | |||||| | || |||||||| || |||||||||||||| Sbjct 28075 TCAATGCATTTCTACTCTTGGAAAAAAGGTCTCAAAACTGGTATGTACTATCTCCG 28020 >seq317 Length=37906 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || || || || || |||| || |||| | ||| |||||||| || || || | Sbjct 22568 GGCGCTAAAATTCCAAGAGGTGCAATTCTTGTTGGTCCACCAGGTACTGGTAAAACTTTA 22627 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 | ||| ||| | || |||||| ||||||| |||||| | ||| | || | Sbjct 22628 ATTGCCAAAGCAACTGCTGGTGAAGCAAATGTACCATTCTTTTCAACCTCAGGTTCAGAT 22687 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 || || || |||||||||||||| ||| | ||| ||| | ||| | || || | || Sbjct 22688 TTCGTTGAAATGTTTGTTGGTGTTGGTCCATCAAGAGTTAGAGATTTATTCGATTTAGCT 22747 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 | | ||| |||||||||||| ||||||||||| |||||||| Sbjct 22748 AGAAAGAATGCACCATGTATTGTTTTCATTGATGAAATTGATGC 22791 >seq213 Length=53756 Score = 82.4 bits (90), Expect = 9e-11 Identities = 185/273 (68%), Gaps = 5/273 (2%) Strand=Plus/Plus Query 64945 TTGATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGT-TATTTGAAGCCATCCA 65003 || ||||| | ||| ||||| ||| || | ||| ||| | ||||| | || || | Sbjct 48074 TTAATTGATACATATATTAAAGATA-ATGAGCAAAAAAGTAAACTATTTAACGCAATAGA 48132 Query 65004 AACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTC 65063 || | ||||||||| | ||||| || | |||||| | |||||| || | | | ||| Sbjct 48133 TACCATTCCATGTATTAAAAAGAAAGCTGATTGGGCATTAAAATGGATTAATA-ATAGTG 48191 Query 65064 TCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGG 65123 || || || || || | |||| ||||| || ||||||||||| ||| || Sbjct 48192 ATTCT--TTTGCAGAACGTTTGGTTGCATTTGCCGCAGTAGAGGGTATCTTTTTCAGTGG 48249 Query 65124 GTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183 || || ||||| ||||| |||||| | ||| | |||||||| || ||| || Sbjct 48250 TAGTTTTTGTAGTATTTTCTGGTTAAAGAAGAGAGGTTTAATGCCAGGTTTAACCTTTTC 48309 Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCA 65216 ||| ||| | || || || ||||| ||||| || Sbjct 48310 AAACGAATTAATCTCTCGTGATGAAGGTCTTCA 48342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596563641761120