Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq317 168 2e-36 seq230 147 6e-30 seq51 125 2e-23 seq64 109 2e-18 seq213 105 2e-17 seq31 93.3 1e-13 seq283 89.7 2e-12 >seq317 Length=37906 Score = 168 bits (186), Expect = 2e-36 Identities = 336/497 (68%), Gaps = 3/497 (1%) Strand=Plus/Minus Query 288847 CTCCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTT 288906 || |||||||| ||||||| ||| ||| ||| |||||| ||||| | |||||| ||| Sbjct 22977 CTTCTATCAAATCTACCAGGACGTAATAAAGCTTTGTCTAAAATATCAGGTCTGTTGGTT 22918 Query 288907 GCTGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGA 288966 ||||| || || || | | || | | |||| |||||||| ||| | |||| Sbjct 22917 GCTGCTAAAACTACTACATTTTTTAATGGAGTAAAACCATCCATTTCAACTAACAATTGA 22858 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 ||||| || | ||| | ||| ||||| ||| | ||| || | | ||| | Sbjct 22857 TTAAGAGTATTTTCACGTTCGTCATT---ACCGCCTGAGAAGCCACCTTGACCTCTTGCT 22801 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 |||||| ||||||||||| |||||||||| | ||| || | ||| | ||| || | Sbjct 22800 CTACCAATGGCATCAATTTCATCAATGAAAACAATACATGGTGCATTCTTTCTAGCTAAA 22741 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 | ||||| ||||| || | |||| |||| ||||||| ||||||| || || || ||| Sbjct 22740 TCGAATAAATCTCTAACTCTTGATGGACCAACACCAACAAACATTTCAACGAAATCTGAA 22681 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | || | || ||||| |||||||||||| || || ||| | || | | || Sbjct 22680 CCTGAGGTTGAAAAGAATGGTACATTTGCTTCACCAGCAGTTGCTTTGGCAATTAAAGTT 22621 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 ||||| || || ||||| || | | | | || |||| | ||| || || | Sbjct 22620 TTACCAGTACCTGGTGGACCAACAAGAATTGCACCTCTTGGAATTTTAGCGCCTATATCG 22561 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 | |||||| || | |||||||| | ||||| ||| |||| |||| ||||| ||| Sbjct 22560 TGGAATTTCTTTGGATTTTTTAAAAAGTTTACAAATTCTTCAATTTCAACCTTTGCTTCA 22501 Query 289327 TCACATCCTGCTACATC 289343 || ||||||||||| Sbjct 22500 CCAAGACCTGCTACATC 22484 >seq230 Length=51241 Score = 147 bits (162), Expect = 6e-30 Identities = 409/622 (66%), Gaps = 13/622 (2%) Strand=Plus/Plus Query 155916 TCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCA 155975 ||||| || | ||| || |||||| ||| || || || || || || | || || Sbjct 29250 TCCATGAAAAGATCGCTGACCCAAAGAGCGTAAAAGAGATCTCTGGCTCTCATTTCTTCC 29309 Query 155976 TCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGA 156035 | || |||||||| || || | ||||| |||||| | || ||| || ||| Sbjct 29310 TTACCATGATTCTTTTTGAGTTCAATAAATTCAAAAATATCTGAGTGCCATGGTTCGAGA 29369 Query 156036 TACATAGCAAAACTACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTA 156092 || | ||||| ||| || || || ||||| ||||||||||| |||||||| | | Sbjct 29370 TATACTGCAAAGGCACCTTTTCTTTTACCACCACCTTGATCTACATAACGAGCAGTATCA 29429 Query 156093 TTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGC 156152 ||||| |||| ||||| || | | |||||| ||||||||||| || ||||||| Sbjct 29430 TTGAAAACACGGAGCATTGGTACCAAACCATTACTGGTGCCATTGGTACCACGAATAT-- 29487 Query 156153 GAAC---CAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAA 156209 ||| || | |||| ||||| | | || |||||||||| |||| ||| Sbjct 29488 -AACTTTGAGCGGCACGAATCTTATGGCAAGCAATACCTATACCACCTGCAGATTTTGAA 29546 Query 156210 ATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGAT 156269 ||| ||| |||| || | |||| ||||||| || || ||||| |||| |||| Sbjct 29547 ATTAAAGCACATTGTTTGAGGGTATCATAAATACCATCGATTGAATCCTCTTTCATTTGA 29606 Query 156270 AGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTT 156329 | || | |||| || | ||| || |||||| ||||| ||||| || || ||||| Sbjct 29607 ACTAAAAAGCATGAGGACATTTGTGGGTATGGTGTACCAGCATTGAAAAGAGTTGGTGTG 29666 Query 156330 GCATGAATAAAATACTTATTAGACATA--TAATCGTATGTCTCCTTAATCTTCTCAAGAT 156387 ||||| | ||| | || || ||| || | ||||| || | || || | || Sbjct 29667 GCATGTGT-AAAGAGTT-TTTGACTTAATTTCTCGTAGGTAAGAATTGCATTGTCGATAT 29724 Query 156388 TAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCA 156447 || ||||||| |||||| || | ||| ||| || || ||||| || || || Sbjct 29725 CGTTACCATGAATACCGATAGAAACACGCATTAGCATGTGTTGTGGACGTTCAACGATGC 29784 Query 156448 CTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACA 156507 | || || |||| |||| ||||| | ||||| || || || |||| | Sbjct 29785 TATTGTTGATACGATGAAGATATGAACGTTCTAATGTTTTGAAACCAAAGAAATCGTAAT 29844 Query 156508 GAAAATCACGGTTGTAATCAAT 156529 |||||||| | ||||||||| Sbjct 29845 CGAAATCACGTTGGTAATCAAT 29866 >seq51 Length=115666 Score = 125 bits (138), Expect = 2e-23 Identities = 213/307 (69%), Gaps = 4/307 (1%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 || |||||| ||| | | |||||| ||||||||||||||| |||||||||||||| Sbjct 79923 TCCTCCATAGCCTTTACAAGACGACGTTGAATATAACCAGTTTCTGATGTTTTTACAGCA 79982 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 |||||||| ||||| | | ||||||||||||||||||||| | ||||| ||| || Sbjct 79983 GTATCAATAAGACCTTCTCTACCACCCATAGCATGGAAGAAAAACTCTTGTGGTGTGAGA 80042 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | | | | |||| || |||||||| || || || || || || Sbjct 80043 CCTCTTAAATAACTATTCTCTACAAAACCACGACTTTCTGGACCATAATCATCTTTAGTG 80102 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 || ||||| | || || | | | || |||| | ||| || || || || || || Sbjct 80103 AAATGTGGTAATGTTCTACTTTGGAAACCAAATGGTACACGTTTACCTTCGACATTTTGT 80162 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTG--CCCTTGGAGCCAGCAT 302869 || || | || | |||||||| |||||||| ||| | || || || || |||||| Sbjct 80163 TGACCTACACAAGCCATCATCTGTGAAATATT--AATGAATGAACCTTTTGAACCAGCAG 80220 Query 302870 TTACCAT 302876 ||||||| Sbjct 80221 TTACCAT 80227 Score = 89.7 bits (98), Expect = 2e-12 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||||| || ||| || |||||| | ||||| || ||| ||||||||| | Sbjct 79121 AATTTCTTTAAGACGTGGTACACCAAGAGTTACATT---CTTACTACTTACACCAGCATA 79177 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 ||||||||||| | ||| | |||||||| ||| ||||||||| ||| || |||| Sbjct 79178 ATGGAAAGTATTTAAAGTCATTTGAGTAGCTGGTTCACCAATAGATTGAGCTGCAAGAGC 79237 Query 301935 ACCAACCATTTCTCCTGG 301952 ||| |||||||| ||||| Sbjct 79238 ACCTACCATTTCACCTGG 79255 >seq64 Length=103366 Score = 109 bits (120), Expect = 2e-18 Identities = 349/536 (65%), Gaps = 4/536 (1%) Strand=Plus/Minus Query 251512 TCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTG 251571 ||||| ||||||||||||||||||||||| | | | ||| || | || |||||||| Sbjct 81917 TCCATCTCACCGAAACGAAGACCACCATCTCTTGAACGACCTTCTACTGGTTGACGAGTA 81858 Query 251572 AGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGA 251631 ||| | | ||||| | || || || || ||||||| ||||||||| || ||| Sbjct 81857 AGAATTTGAACTGGACCTCTTGAACGACTGTGAATTTTATCATCTACCATATGTTTAAGA 81798 Query 251632 CGCTGGTAGAATGCGGGACCGATGAAGATGCTCGAAGGCATTTGCTCTCCAGTTAGAGCG 251691 || ||||| | | ||||| ||||| || | | ||| | ||||| || | Sbjct 81797 CGTTGGTAATAGGTTGGACCAATGAAAATTTGAGCATCCATACGACGACCAGTGTGACCA 81738 Query 251692 TTATACATAACTTCGTTTCCATTAGATTCATAACCAAGTTTCTGTAGCTCTGAAGCAATA 251751 |||||||||||||||| ||| | || |||||||| ||| || || || | |||| Sbjct 81737 TTATACATAACTTCGTGACCAGTCATTTGATAACCAACTTTGTGAAGAGCTTGTGAAATA 81678 Query 251752 TCACCAATCTTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCA-A 251810 | | | | | | | || ||| | || || | | | ||| |||| || | Sbjct 81677 GCTTCTACAGTAACATCAGTGAATGGAGTGGCATCACCTTCATCA-CCAGTTGAGGCAGA 81619 Query 251811 CACTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATG 251870 ||||| |||||||| || | | ||| | |||||||||||| |||||||| || Sbjct 81618 AACTTTACCTAAAAGACATTCAATTAATTGACCAATAGTCATACGAGATGGAATAGCGTG 81559 Query 251871 GGGATTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTC 251930 ||||| | | || || || | || || |||| | || | || ||| | | Sbjct 81558 TGGATTTACAACAATATCTGGAACAATACCTTCTACAGTCCATGGTAAAT-CTTCTTGAC 81500 Query 251931 AATAA-TGTTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAATAA 251989 |||| | ||| ||| || ||||| || ||||| ||| ||| ||||||||||| Sbjct 81499 GATAAGCCATACCACAAGTACCTTTTTGACCATGACGTGAAGAGAATTTATCACCAATTT 81440 Query 251990 CAGGACGGCGAACACTACGAAGGCGAACCTTACAGAAGTTGTAACCATCACCGTTG 252045 || | | ||||| | ||| |||||||| || |||| |||||| || Sbjct 81439 GTGGTACTCTCATTGAACGAACTCTAACTTTACAGAATTTAAAACCTTCACCGCTG 81384 >seq213 Length=53756 Score = 105 bits (116), Expect = 2e-17 Identities = 379/580 (65%), Gaps = 21/580 (4%) Strand=Plus/Plus Query 133374 TAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATTAGCG 133433 |||||||||| || || ||||||| | || || |||||||| ||||| || || Sbjct 48075 TAATTGATACATATATTAAAGATAATGAGCAAAAAAGTAAACTATTTAACGCAAT-AGAT 48133 Query 133434 AAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGT 133492 | |||| ||||||||||||||| |||| ||||| | |||||||| | || || Sbjct 48134 ACCATTCCATGTATTAAAAAGAAAGCTGATTGGGCATTAAAATGGAT---TAATAATAGT 48190 Query 133493 GCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGT 133552 | |||||| ||| | ||||| ||||| | ||||||||| || |||||||||||| Sbjct 48191 GATTCTTTTGCAGAACGTTTGGTTGCATTTGCCGCAGTAGAGGGTATCTTTTTCAGTGGT 48250 Query 133553 GCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCT 133612 || || |||||| ||| | || ||| | ||| | | || || | ||||| Sbjct 48251 AGTTTTTGTAGTATTTTCTGGTTAAAGAAGAGAGGTTTAATGCCAGGTTTAACCTTTTCA 48310 Query 133613 AACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCT 133672 |||||| | || || | || || | ||||| | | ||||| | | | || | Sbjct 48311 AACGAATTAATCTCTCGTGATGAAGGTCTTCATTGCAATTTTGCATGTCTTTTATACACC 48370 Query 133673 AAATTAGAGCGAC-CACTCAAAAAGAATAAGATTGAAGAAATTATTAGAGAAGCGGTTGA 133731 |||||| | || |||| || || | |||||| ||||||||||| || |||| Sbjct 48371 AAATTA-ATAAACAAACTCGAATCCAAGACTCTTGAAGCCATTATTAGAGATGCCGTTGT 48429 Query 133732 AATTGAGGTTGAATTTATCAATAGTG---CTCTGCCGTGCCGTTTAATTGGTATGAAT-G 133787 || |||||||| | ||| || | || |||||||||||||||| | Sbjct 48430 TTGCGAAAAAGAATTTAT---TTGTGACTCTTTACCAGTAGATTTAATTGGTATGAATAG 48486 Query 133788 ATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGACAG---ATTGGCCGTTCAGTTAG 133844 || | ||| | || ||||||||| ||||| | |||| | ||| || | Sbjct 48487 TCGTTC-AATGTCTCAATACATTGAATTTTGTGCTGATCGTCTTTTGGTC--TCA-TTGG 48542 Query 133845 GTGGGGATAAGATTTACGGTTCCGCCAATCCATTCGACTGGATGGAGAGCATTAGCATTG 133904 || | |||||||| | | | ||||| || || |||||||| | ||| | | Sbjct 48543 GTTATAAAAAGATTTATAATGCTTCAAATCCTTTTGATTGGATGGAAATGATTTCCCTCC 48602 Query 133905 AATCAAAGACTAATTTCTTCGAGGCGAGGGTAGCCGAATA 133944 || ||| || || || ||||| | | ||||||||||| Sbjct 48603 AAAGAAAAACAAACTTTTTCGAAGGTAAAGTAGCCGAATA 48642 >seq31 Length=135748 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/178 (72%), Gaps = 6/178 (3%) Strand=Plus/Plus Query 233271 TAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCAT 233330 ||||||| | | |||| | |||||| | |||||||||||| | ||| ||||||||| | Sbjct 29662 TAGCACCATAACCAATAAGACAATCTCTTTCCATTTCACCTAAACGAAGACCACCACCTC 29721 Query 233331 TTGACCTACCCTGGACTGTTTGACGAGTTA---AAACAGTTCTTGGACCCTGAGCACGAT 233387 | | ||||| | || ||||||||| | ||||| ||||||| ||||||| Sbjct 29722 TGGCTCTACCTTCAGTTGGTTGACGAGTGAGAGTAACAG---TTGGACCTCTAGCACGAG 29778 Query 233388 AATTAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAATAAA 233445 || |||||||| |||||||||| || ||| | |||| || ||||||| ||| Sbjct 29779 CATGCATTTTATCCATAACCATATGTTTAAGTTTTTGATAAAAAATTGGACCAAAAAA 29836 >seq283 Length=43694 Score = 89.7 bits (98), Expect = 2e-12 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332 ||||| ||||| | | || ||||||||||||||||| | ||| | ||||||| || | Sbjct 11063 GCACCATGAGCTAAAAGACTGTCACGTTCCATTTCACCGAAACGAATACCACCACCAACT 11122 Query 233333 GACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392 | ||||| || || |||||||||||| || | | ||| |||| | || || Sbjct 11123 TTACGACCCTTGATTGGTTGACGAGTTAATGCATTAACTTTACCAAGAGCTC-TTACTTG 11181 Query 233393 AT-TTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAATAAATAGTTC 233451 || ||||||||||||||| || || | ||||||||| ||||| || | ||| Sbjct 11182 ATATTTATCTTTAACCATGTGACGAAGACGTTGATAATAACAAACACCAAAGAAGATTTC 11241 Query 233452 TGCGTGTAATTGTTCCCCAGATTCACCGCTGTATAAAACTTCATTACC 233499 || | |||| || |||| ||| ||||| | | ||||||||| Sbjct 11242 AGCTTCAAATTCTTTACCAGTAGTACCACTGTACATAGTTTCATTACC 11289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471802532727263