Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq29 118 1e-21 seq64 89.7 7e-13 seq392 84.2 3e-11 seq31 82.4 1e-10 >seq29 Length=138075 Score = 118 bits (130), Expect = 1e-21 Identities = 222/327 (68%), Gaps = 12/327 (4%) Strand=Plus/Plus Query 165970 TGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAACAAAATTTATGTGAAACTAT 166029 ||| ||||| || || |||||| |||| | || ||||||||| ||| | ||| || Sbjct 82492 TGGTTATGTAGCTGAGCAAACATCTTATCATCACGGTGAACAATCATTAAATTCAACAAT 82551 Query 166030 AATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGCATTACTTGAACCTGATGG 166089 ||||| | || || ||||||||||| ||||||||||| ||||| | ||| ||| Sbjct 82552 TATTAAAATGGCACATAATTTTGTTGGTTCAAATAATATACCATTATTAACACCCTCTGG 82611 Query 166090 TCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCTGCATCAAGATATATTTATAC 166149 |||||| ||||| | ||| |||| ||| | ||||| || | |||||||||||| || Sbjct 82612 TCAATTCGGTACTCGTTTACAAGGTGGTGATGATTCAGCATCTGCAAGATATATTTTCAC 82671 Query 166150 CAAACCACATAAAATATTAAAATATATATTTAGAGAAGAAGATGACCCTATTTTAAATTA 166209 |||| | ||| | | || | |||| ||| ||||| || | ||||| || Sbjct 82672 TAAACTCGAACCAATTTCACGTCATCTCTTTAATGAAATGGATGATGCTCTCTTAAACTA 82731 Query 166210 TACT---GTTGAGGGTGAACCTATTC---------ATTTTATTCCAGTAATCCCATTAAT 166257 | | | ||||||||| |||||| | | | | ||| | |||||| | | Sbjct 82732 TCTTGAAGAAGAGGGTGAATCTATTCAGCCAGATTACTATGTACCAATTATCCCAATGGT 82791 Query 166258 TTTAATTAATGGTTCTATTGGTATTGG 166284 |||| |||||||| | |||||||| Sbjct 82792 TTTAGTTAATGGTAGTGAAGGTATTGG 82818 >seq64 Length=103366 Score = 89.7 bits (98), Expect = 7e-13 Identities = 121/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 194240 TACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTATG 194298 |||| |||| || |||||||| | ||| | |||| ||||||||| |||||||||||| Sbjct 81434 TACCACAAATTGGTGATAAATTCTCTTCACGTCATGG-TCAAAAAGGTACTTGTGGTATG 81492 Query 194299 ATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATC 194358 |||| ||||||||| | |||| || |||||| || ||||||||| || | Sbjct 81493 GCTTATCGTCAAGAAGATTTACCATGGACTGTAGAAGGTATTGTTCCAGATATTGTTGTA 81552 Query 194359 AATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTG 194404 |||||| | |||||| || | ||||| ||| |||| | |||| Sbjct 81553 AATCCACACGCTATTCCATCTCGTATGACTATTGGTCAATTAATTG 81598 >seq392 Length=30415 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/167 (72%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 90781 TATCCCAATGGTAGACCAAACCCTTTATATGCAAAACAAGCAG--AAATGTGGGGTGTAG 90838 ||||| ||||| ||||||||||| |||||| || | | |||| ||| | || Sbjct 7333 TATCCAAATGGAAGACCAAACCCAATATATGGTGAAGAGGTTATTAAATATGGAGC-TAC 7391 Query 90839 ATGGTTTAATTTTTGGTTTTATTACTTTATCAGCTaaaaaaaaaGCATGTTGGGCTGCAC 90898 ||| ||||| ||||| |||||||||||| || | || |||| ||||||||||| | Sbjct 7392 -TGGCTTAATGTTTGGATTTATTACTTTAGCATCCAATGGTGAAGCTTGTTGGGCTGCTC 7450 Query 90899 AAGATACTATGCCTTTAAATTGGTCTTTACCTTTGGCCAAAGAACTT 90945 || || ||| || || ||||| || |||| || || || |||||| Sbjct 7451 AACCAACAATGGCTCTAGATTGGGCTGTACCATTAGCAAATGAACTT 7497 >seq31 Length=135748 Score = 82.4 bits (90), Expect = 1e-10 Identities = 118/164 (72%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 194242 CCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTATGAT 194300 || ||| |||| || || |||| ||| | |||| ||||||||| ||||||||| || Sbjct 30172 CCAGAATTAGGTGACAAGTTTTCATCGCGTCATGG-TCAAAAAGGTGTTTGTGGTATCAT 30114 Query 194301 TTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAA 194360 | | |||||| ||||||||||| | || ||||| |||||||||||||| || Sbjct 30113 TGTTAAACAAGAGGATATGCCATTCTCTGATTTGGGTATTTGTCCAGATATTATTATGAA 30054 Query 194361 TCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTG 194404 ||| || || | || || | ||||| ||| | |||| |||| Sbjct 30053 TCCCCATGGTTTCCCATCTCGTATGACTATTGGTAAAATGATTG 30010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632483283010120