Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq242 116 3e-21 seq86 107 2e-18 seq246 104 2e-17 seq7 89.7 4e-13 >seq242 Length=49570 Score = 116 bits (128), Expect = 3e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA-GCCTGA 110331 |||||||| || || |||||||||||||| ||||||||||| | ||| || | || | Sbjct 3833 ATGCAAATTTTCGTTAAAACTTTAACCGGTAAAACCATTACTTTAGAAGTTGAAGGCTCA 3774 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| | | | || ||| || ||| ||||||||||| | || ||||| Sbjct 3773 -GATACTATTGAAAACGTTAAAACTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCA 3715 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||||||||||||| ||| |||||||| | || |||| | || | | || ||||| Sbjct 3714 ACAAAGACTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTACAA 3655 Query 110452 CATTCAAAAAGAATCTAC 110469 ||||||||||||||| || Sbjct 3654 CATTCAAAAAGAATCAAC 3637 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAA-ACGGAGCCTGA 110331 |||||||| || ||||||||||||||||| ||||| ||||| | ||| | || || | Sbjct 4061 ATGCAAATTTTCGTCAAAACTTTAACCGGTAAAACTATTACTTTAGAAGTTGAAGGCTCA 4002 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | ||||| |||||| || |||||||| | || ||||| Sbjct 4001 -GATACAATTGAAAATGTAAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCA 3943 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||| | | |||| ||| |||||||| | || |||| | || | | || || || Sbjct 3942 ACAACGTTTAATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTATAA 3883 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||||||||| || | || | || |||||||| || || || Sbjct 3882 TATCCAAAAAGAATCAACTCTCCATTTAGTATTAAGACTTCGTGGTGG 3835 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331 |||||||| ||||| ||||| | || || |||||||||||| ||||| || || || | Sbjct 4517 ATGCAAATTTTTGTTAAAACCCTTACTGGTAAAACCATTACCCTCGAAGTCGAAGGCTCA 4458 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | || ||| || || || |||||||| | || ||||| Sbjct 4457 -GATACAATTGAAAACGTCAAAACCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCA 4399 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||||||||||||| ||| |||||||| | || |||| | || | | || || || Sbjct 4398 ACAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATAA 4339 Query 110452 CATTCAAAAAGAATCTAC 110469 || ||||||||||| || Sbjct 4338 TATCCAAAAAGAATCAAC 4321 >seq86 Length=87693 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331 |||||||| || |||||||| | || || |||||||| ||| ||||| || || || | Sbjct 63068 ATGCAAATTTTCGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63127 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| ||| | || ||| |||||| || |||||||| | || ||||| Sbjct 63128 -GATACCATCGAAAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCA 63186 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||| | || |||| ||| |||||||| | || |||| | || | | || ||||| Sbjct 63187 ACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAA 63246 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||||||| || | || | || |||||||| || || || Sbjct 63247 CATTCAAAAAGAATCAACTCTCCATTTAGTTTTAAGACTCCGTGGTGG 63294 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331 |||||||| ||||||||||| | || || |||||||| ||| ||||| || || || | Sbjct 63752 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63811 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | || ||| |||||| ||||| ||||| | || ||||| Sbjct 63812 -GATACCATTGAAAACGTCAAAACCAAGATTCAAGACAAGGAAGGTATCCCACCAGATCA 63870 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||| | || |||| ||| |||||||| | || |||| | || | | || || || Sbjct 63871 ACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATAA 63930 Query 110452 CATTCAAAAAGAATCTAC 110469 ||||||||||||||| || Sbjct 63931 CATTCAAAAAGAATCAAC 63948 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331 |||||||| ||||||||||| | || || |||||||| ||| ||||| || || | | Sbjct 63296 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 63355 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | || ||| || || ||||||||||| | || || || Sbjct 63356 -GATACCATTGAAAATGTTAAAACCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCA 63414 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||| | ||||||| || |||||||| | || |||| | || | | |||||||| Sbjct 63415 ACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 63474 Query 110452 CATTCAAAAAGAATCTAC 110469 |||||||||||||| || Sbjct 63475 TATTCAAAAAGAATCAAC 63492 >seq246 Length=49296 Score = 104 bits (114), Expect = 2e-17 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 110266 ATTTAAAA--TGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323 |||||||| ||||||| ||||| ||||| | || ||||||||||| ||| | || Sbjct 11276 ATTTAAAACATGCAAATTTTTGTAAAAACCCTTACTGGCAAAACCATCACCTTAGAGGTC 11217 Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 || | |||||| | | | |||||| || || || |||||||| | || Sbjct 11216 GAAGGTTCTGATACTATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATCCCA 11157 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 ||||||||||||||||| | ||| |||||||| | || |||| | || | | Sbjct 11156 CCAGATCAACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCC 11097 Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||| ||||||||||||||||| | || | || |||||||| || || || Sbjct 11096 GACTACAATATTCAAAAAGAATCTACCCTCCATTTAGTTTTAAGACTTCGTGGTGG 11041 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||| ||||| || ||||||||||| | ||| || | Sbjct 10811 ATGCAAATTTTTGTAAAAACCTTAACTGGTAAAACCATTACTTTAGAAGTCGAAGGTTCT 10752 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | |||||| || || || |||||||| | || |||||| Sbjct 10751 GATACCATCGAAAATGTAAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 10692 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || |||| ||| |||||||| | || |||| | || | | || ||||| Sbjct 10691 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTACAAT 10632 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||| || | || | || |||||| | |||| || Sbjct 10631 ATTCAAAAAGAATCAACTCTTCATTTAGTATTAAGATTAAGAGGTGG 10585 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||| ||||| || || || || ||| | ||| || | Sbjct 11039 ATGCAAATTTTTGTAAAAACCTTAACTGGTAAGACTATCACCTTAGAAGTCGAAGGTTCT 10980 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | |||||| || || ||||||||||| | || |||||| Sbjct 10979 GATACCATCGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 10920 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || |||| ||| |||||||| | || |||| | || | | || || || Sbjct 10919 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTATAAT 10860 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||| || | || | || |||||||| || || || Sbjct 10859 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGACTTCGTGGTGG 10813 >seq7 Length=199231 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAA-ACGGAGCCTGA 110331 |||||||| ||||||||||||||||| || ||||||||||| | ||| | || || | Sbjct 43086 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAAGGCTCA 43145 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| ||| | || ||| |||||| || |||||||| | || || || Sbjct 43146 -GATACCATCGAGAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGACCA 43204 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||| | | |||| ||| |||||||| | || || | | || | | ||||| || Sbjct 43205 ACAACGTTTAATTTTTGCAGGTAAACAATTAGAAGACGGTCGTACTCTCTCAGATTATAA 43264 Query 110452 CATTCAAAAAGAATCTAC 110469 || |||||||||||||| Sbjct 43265 TATCCAAAAAGAATCTAC 43282 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 110266 ATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAA-ACGG 110324 ||| || |||||||| ||||||||||||||||| || |||||||| ||| ||||| || Sbjct 42851 ATTCAATATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATCACCCTCGAAGTCGA 42910 Query 110325 AGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCG 110384 || | | ||||| | | | || ||| || || || |||||||| | || Sbjct 42911 AGGTTCA-GATACCATTGAAAATGTTAAAACCAAAATCCAAGATAAAGAAGGTATCCCAC 42969 Query 110385 TGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGG 110444 || |||||| | | |||| || |||||||| | || |||| | || | | | Sbjct 42970 CAGACCAACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTG 43029 Query 110445 ATTACAACATTCAAAAAGAATCTAC 110469 | |||||||| |||||||||||||| Sbjct 43030 ACTACAACATCCAAAAAGAATCTAC 43054 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAA-ACGGAGCCTGA 110331 |||||||| ||||||||||| ||||| || |||||||| ||| ||||| || || | | Sbjct 43770 ATGCAAATTTTTGTCAAAACATTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 43829 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | || ||| || || || |||||||| | || || || Sbjct 43830 -GATACCATTGAAAACGTTAAAACTAAAATCCAAGATAAAGAAGGTATTCCACCAGACCA 43888 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||| | | |||| || |||||||| | || |||| | || | | || ||||| Sbjct 43889 ACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAA 43948 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 ||| |||||||||||||| | || | || | ||| || |||| ||||| Sbjct 43949 CATCCAAAAAGAATCTACCCTCCATTTAGTCCTCAGATTGAGAGGTGGAAA 43999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412837579825907