Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq242 93.3 3e-14 seq7 93.3 3e-14 seq246 84.2 2e-11 seq86 84.2 2e-11 >seq242 Length=49570 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAA-ACGGAGGCTGG 107614 ||||||||||| || ||||||||||| || ||||||||||| | ||| | ||||| Sbjct 3833 ATGCAAATTTTCGTTAAAACTTTAACCGGTAAAACCATTACTTTAGAAGTTGAAGGCT-C 3775 Query 107615 CGATACTGTCGGCCA-GGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 |||||| | | | | |||||| ||| ||| || |||||||| | || |||| Sbjct 3774 AGATACTATTGAAAACGTTAAAACTAAA-ATTCAAGACAAAGAAGGTATCCCACCAGATC 3716 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 | || |||||||||| ||| |||||||| | || || | || | | ||||||| Sbjct 3715 AACAAAGACTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTACA 3656 Query 107734 ACATTCAAAAGGAGTCTAC 107752 |||||||||| || || || Sbjct 3655 ACATTCAAAAAGAATCAAC 3637 Score = 82.4 bits (90), Expect = 6e-11 Identities = 110/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAA-ACGGAGGCTGG 107614 |||||||||||||| ||||| | || || |||||||||||| ||||| || ||||| Sbjct 4517 ATGCAAATTTTTGTTAAAACCCTTACTGGTAAAACCATTACCCTCGAAGTCGAAGGCT-C 4459 Query 107615 CGATACTGTCGGCCAGGT-AAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 ||||| | | | || ||||| ||| || ||||||||||| | || |||| Sbjct 4458 AGATACAATTGAAAACGTCAAAACCAAA-ATCCAAGATAAAGAAGGTATCCCACCAGATC 4400 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACA 107701 | || |||||||||| ||| |||||||| Sbjct 4399 AACAAAGACTTATTTTTGCTGGTAAACA 4372 >seq7 Length=199231 Score = 93.3 bits (102), Expect = 3e-14 Identities = 171/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||||||||| ||||| || |||||||| ||| ||||| || | | Sbjct 43770 ATGCAAATTTTTGTCAAAACATTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 43829 Query 107616 GATACTGTCGGCCA-GGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | | |||||| ||| || ||||||||||| | || || || Sbjct 43830 GATACCATTGAAAACGTTAAAACTAAA-ATCCAAGATAAAGAAGGTATTCCACCAGACCA 43888 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 || | | |||| || |||||||| | || || | || | | |||||||| Sbjct 43889 ACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAA 43948 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAA 107794 ||| ||||| || ||||| | || | || | |||||| |||| |||||| ||||| Sbjct 43949 CATCCAAAAAGAATCTACCCTCCATTTAGTCCTCAGATTGAGAGGTGGAAAT--TAAAAG 44006 Query 107795 TATTTGT 107801 ||||||| Sbjct 44007 TATTTGT 44013 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 107550 TTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG 107609 || || |||||||||||||||||||||||||| || |||||||| ||| ||||| || Sbjct 42852 TTCAATATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATCACCCTCGAAGTCGAA 42911 Query 107610 GCTGGCGATACTGTCGGCCA-GGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGT 107668 | | ||||| | | | | |||||| ||| || ||||||||||| | || Sbjct 42912 GGTTCAGATACCATTGAAAATGTTAAAACCAAA-ATCCAAGATAAAGAAGGTATCCCACC 42970 Query 107669 GGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGA 107728 || || || | | |||| || |||||||| | || || | || | | || Sbjct 42971 AGACCAACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGA 43030 Query 107729 CTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||| ||||| || ||||| | || | || | |||||| |||| || Sbjct 43031 CTACAACATCCAAAAAGAATCTACCCTCCATTTAGTTCTCAGATTGAGAGGTGG 43084 >seq246 Length=49296 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/205 (69%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 107550 TTTAAAA--TGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGG 107607 ||||||| ||||||||||||| ||||| | || ||||||||||| ||| | || | Sbjct 11275 TTTAAAACATGCAAATTTTTGTAAAAACCCTTACTGGCAAAACCATCACCTTAGAGGTCG 11216 Query 107608 AGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCG 107667 | | | |||||| | | | |||||| || || ||||||||||| | || Sbjct 11215 AAGGTTCTGATACTATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTATCCCAC 11156 Query 107668 TGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGG 107727 ||||| || |||||||| | ||| |||||||| | || || | || | | | Sbjct 11155 CAGATCAACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCG 11096 Query 107728 ACTACAACATTCAAAAGGAGTCTAC 107752 ||||||| |||||||| || ||||| Sbjct 11095 ACTACAATATTCAAAAAGAATCTAC 11071 >seq86 Length=87693 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAA-ACGGAGGCTGG 107614 ||||||||||| |||||||| | || || |||||||| ||| ||||| || ||||| Sbjct 63068 ATGCAAATTTTCGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCT-C 63126 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| ||| | || ||| |||||| ||||||||||| | || ||||| Sbjct 63127 AGATACCATCGAAAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCA 63186 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 || | || |||| ||| |||||||| | || || | || | | |||||||| Sbjct 63187 ACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAA 63246 Query 107735 CATTCAAAAGGAGTCTAC 107752 ||||||||| || || || Sbjct 63247 CATTCAAAAAGAATCAAC 63264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398872915812511