Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq29 113 6e-20 seq64 98.7 1e-15 seq392 84.2 3e-11 seq31 82.4 1e-10 >seq29 Length=138075 Score = 113 bits (124), Expect = 6e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 163018 TGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAACAAAATTTATGTGAAACTAT 163077 ||| ||||| || || |||||| ||| | |||||||||||| ||| | ||| || Sbjct 82492 TGGTTATGTAGCTGAGCAAACATCTTATCATCACGGTGAACAATCATTAAATTCAACAAT 82551 Query 163078 AATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGCATTACTTGAACCTGATGG 163137 ||||| | || || ||||||||||| ||||||||||| ||||| | ||| ||| Sbjct 82552 TATTAAAATGGCACATAATTTTGTTGGTTCAAATAATATACCATTATTAACACCCTCTGG 82611 Query 163138 TCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGGCATCAAGATATATTTATAC 163197 |||||| ||||| | ||| |||| ||| | ||||| || | |||||||||||| || Sbjct 82612 TCAATTCGGTACTCGTTTACAAGGTGGTGATGATTCAGCATCTGCAAGATATATTTTCAC 82671 Query 163198 CAAAC 163202 |||| Sbjct 82672 TAAAC 82676 >seq64 Length=103366 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/166 (74%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 193444 TACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGGTATG 193502 |||| |||| || |||||||| | |||| | |||| | ||||||| |||||||||||| Sbjct 81434 TACCACAAATTGGTGATAAATTCTCTTCACGTCATGGTC-AAAAAGGTACTTGTGGTATG 81492 Query 193503 ATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATT 193562 |||| ||||||||| | |||| || | |||||| || ||||||||| || | Sbjct 81493 GCTTATCGTCAAGAAGATTTACCATGGACTGTAGAAGGTATTGTTCCAGATATTGTTGTA 81552 Query 193563 AATCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTG 193608 |||||| | ||||||||| | ||||| ||| |||| | |||| Sbjct 81553 AATCCACACGCTATTCCATCTCGTATGACTATTGGTCAATTAATTG 81598 >seq392 Length=30415 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/167 (72%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 91967 TATCCTAATGGTAGACCAAACCCTTTATATGCAAAACAAGCAG--AAATGTGGGGTGTAG 92024 ||||| ||||| ||||||||||| |||||| || | | |||| ||| | || Sbjct 7333 TATCCAAATGGAAGACCAAACCCAATATATGGTGAAGAGGTTATTAAATATGGAGC-TAC 7391 Query 92025 ATGGTTTAATTTTTGGTTTTATTACTTTATCAGCTaaaaaaaaaGCATGTTGGGCTGCGC 92084 ||| ||||| ||||| |||||||||||| || | || |||| ||||||||||| | Sbjct 7392 -TGGCTTAATGTTTGGATTTATTACTTTAGCATCCAATGGTGAAGCTTGTTGGGCTGCTC 7450 Query 92085 AAGATACTATGCCTTTAAATTGGTCTTTACCTTTGGCCAAAGAACTT 92131 || || ||| || || ||||| || |||| || || || |||||| Sbjct 7451 AACCAACAATGGCTCTAGATTGGGCTGTACCATTAGCAAATGAACTT 7497 >seq31 Length=135748 Score = 82.4 bits (90), Expect = 1e-10 Identities = 118/164 (72%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 193446 CCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGGTATGAT 193504 || ||| |||| || || |||| || | |||| | ||||||| ||||||||| || Sbjct 30172 CCAGAATTAGGTGACAAGTTTTCATCGCGTCATGGTC-AAAAAGGTGTTTGTGGTATCAT 30114 Query 193505 TTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAA 193564 | | |||||| ||||||||||| | | || ||||| |||||||||||||| || Sbjct 30113 TGTTAAACAAGAGGATATGCCATTCTCTGATTTGGGTATTTGTCCAGATATTATTATGAA 30054 Query 193565 TCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTG 193608 ||| || || | ||||| | ||||| ||| | |||| |||| Sbjct 30053 TCCCCATGGTTTCCCATCTCGTATGACTATTGGTAAAATGATTG 30010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635171256163720