Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq64 87.8 2e-12 >seq64 Length=103366 Score = 87.8 bits (96), Expect = 2e-12 Identities = 207/304 (68%), Gaps = 23/304 (8%) Strand=Plus/Plus Query 200955 ATTATACCATTTTCTGATAGAACACAATCAGCGCGAAATTGTTTTTATACTTCTATGGTT 201014 ||||| ||||| | ||| | |||||| | || ||| | | | || |||||| | Sbjct 80779 ATTATTCCATTCCCAGATCATAATCAATCACCTCGTAATACCTATCAAGCTGCTATGGGT 80838 Query 201015 AAACAAGCTATAGGTTTTGTTCCATGTCACAACTTAAAAACT-------GAAACTGTATC 201067 || |||||||| ||| || | ||| |||| ||| |||| || ||| | | Sbjct 80839 AAGCAAGCTATGGGTGTT--TACATT--ACAAATTATCAACTACGTATGGATACTATGGC 80894 Query 201068 ACAT--AC-CTTAAATTATCCTCAAAAACCACTTGTTACAACTGA--CATTGCAGAATTT 201122 ||| || ||| |||||| |||||||| | ||||||||| || || | |||| Sbjct 80895 TCATGTACTCTT---TTATCCACAAAAACCTTTAGTTACAACTCGTTCAATGGAATATTT 80951 Query 201123 A-ATGGTCTAAATGAATACCCCAATGGTATTAATGCAATTGTAGCAATTGCATGTTACAC 201181 | || | || | |||| || ||| ||||| |||||| ||||| |||||| | Sbjct 80952 ACAT--TTTAGA-GAATTACCAGCCGGTCAAAATGCTTGTGTAGCTATTGCTTGTTACTC 81008 Query 201182 TGGATACAATCAAGAAGATAGTGTTATTCTTAATAAAGCATCTATTGAAAGAGGTTTATT 201241 ||| ||||||||||||||| ||| ||||||||| || | |||| || | |||||||| Sbjct 81009 TGGTTACAATCAAGAAGATTCTGTAATTCTTAATCAATCTGCTATCGATCGTGGTTTATT 81068 Query 201242 CGGT 201245 | || Sbjct 81069 CCGT 81072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655273455391000