Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq29 120 4e-22 seq64 86.0 8e-12 seq392 84.2 3e-11 >seq29 Length=138075 Score = 120 bits (132), Expect = 4e-22 Identities = 199/287 (69%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 |||||||| | ||| | ||| ||||| || || |||||| |||| | || |||||| Sbjct 82472 ATTAAAGTATCGCAACTCTCTGGTTATGTAGCTGAGCAAACATCTTATCATCACGGTGAA 82531 Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279 ||| ||| | ||| || ||||| | || || ||||||||||| ||||||||||| Sbjct 82532 CAATCATTAAATTCAACAATTATTAAAATGGCACATAATTTTGTTGGTTCAAATAATATA 82591 Query 165280 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 165339 ||||| | ||| ||||||||| ||||| | ||| |||| ||| | ||||| || Sbjct 82592 CCATTATTAACACCCTCTGGTCAATTCGGTACTCGTTTACAAGGTGGTGATGATTCAGCA 82651 Query 165340 GCATCAAGATATATTTATACCAAACCACATAAAATATTAAAATATATATTTAGAGAAGAA 165399 | |||||||||||| || |||| | ||| | | || | |||| ||| Sbjct 82652 TCTGCAAGATATATTTTCACTAAACTCGAACCAATTTCACGTCATCTCTTTAATGAAATG 82711 Query 165400 GATGACCCTATTTTAAATTATACT---GTTGAGGGTGAACCTATTCA 165443 ||||| || | ||||| ||| | | ||||||||| ||||||| Sbjct 82712 GATGATGCTCTCTTAAACTATCTTGAAGAAGAGGGTGAATCTATTCA 82758 >seq64 Length=103366 Score = 86.0 bits (94), Expect = 8e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 192997 TACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGGAACTTGTGGTATG 193055 |||| |||| || |||||||| | ||| | |||| | ||||||| |||||||||||| Sbjct 81434 TACCACAAATTGGTGATAAATTCTCTTCACGTCATGGTC-AAAAAGGTACTTGTGGTATG 81492 Query 193056 ATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATT 193115 |||| ||||||||| | |||| || |||||| || ||||||||| || | Sbjct 81493 GCTTATCGTCAAGAAGATTTACCATGGACTGTAGAAGGTATTGTTCCAGATATTGTTGTA 81552 Query 193116 AATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTG 193161 |||||| | |||||| || | ||||| ||| |||| | |||| Sbjct 81553 AATCCACACGCTATTCCATCTCGTATGACTATTGGTCAATTAATTG 81598 >seq392 Length=30415 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/167 (72%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 89455 TATCCCAATGGTAGACCAAATCCTTTATATGCAAAACAAGCAG--AAATATGGGGTGTAG 89512 ||||| ||||| |||||||| || |||||| || | | |||||||| | || Sbjct 7333 TATCCAAATGGAAGACCAAACCCAATATATGGTGAAGAGGTTATTAAATATGGAGC-TAC 7391 Query 89513 ATGGTTTAATTTTTGGTTTTATTACTTTATCAGCTaaaaaaaaaGCATGTTGGGCTGCAC 89572 ||| ||||| ||||| |||||||||||| || | || |||| ||||||||||| | Sbjct 7392 -TGGCTTAATGTTTGGATTTATTACTTTAGCATCCAATGGTGAAGCTTGTTGGGCTGCTC 7450 Query 89573 AAGATACTATGCCTTTAAATTGGTCTTTACCTTTGGCCAAAGAACTT 89619 || || ||| || || ||||| || |||| || || || |||||| Sbjct 7451 AACCAACAATGGCTCTAGATTGGGCTGTACCATTAGCAAATGAACTT 7497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628524922544640