Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq246 129 4e-25 seq7 125 5e-24 seq242 122 6e-23 seq86 113 3e-20 >seq246 Length=49296 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | ||| || ||||| ||||| |||||||| || ||||| ||||| Sbjct 10584 ACCACCTCTTAATCTTAATACTAAATGAAGAGTTGATTCTTTTTGAATATTGTAGTCGGA 10643 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || |||||||| ||||||||||| | ||| || |||||| | || Sbjct 10644 AAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGG 10703 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||||| | || |||| || | ||| || ||| | Sbjct 10704 GATACCTTCTTTATCTTGGATTTT-GGCTTTTACATTTTCGATGGTATCAGAACCTTCGA 10762 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| ||||| ||||||||||| || |||||| Sbjct 10763 CTTCTAAAGTAATGGTTTTACCAGTTAAGGTTTTTACAAAAATTTGCATA 10812 Score = 114 bits (126), Expect = 8e-21 Identities = 156/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 33537 TAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTC 33596 ||| || ||||| ||||| |||||||| || || || ||||| || || || | || Sbjct 10827 TAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCGGAAAGAGTACGACCATC 10886 Query 33597 GTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 || |||||||| ||||||||||| | ||| || |||||| | || | |||||||||||| Sbjct 10887 TTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTGTC 10946 Query 33657 GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCG 33715 ||||| | || |||| || | ||| || ||| || || | ||||| | Sbjct 10947 TTGGATTTT-AGCTTTTACATTTTCGATGGTATCAGAACCTTCGACTTCTAAGGTGATAG 11005 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | ||||| ||||| ||||||||||| || |||||| Sbjct 11006 TCTTACCAGTTAAGGTTTTTACAAAAATTTGCATA 11040 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 33537 TAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTC 33596 ||| || ||||| || || |||||||| || ||||| ||||| || || || | || Sbjct 11055 TAAAACTAAATGGAGGGTAGATTCTTTTTGAATATTGTAGTCGGAAAGAGTACGACCATC 11114 Query 33597 GTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 || |||||||| |||||||| || | | || |||||| | || | ||||||||| || Sbjct 11115 TTCTAATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTATC 11174 Query 33657 GGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCG 33715 ||||| ||| | ||| ||| || || ||| || || | ||||| | Sbjct 11175 TTGGATTTTAGCTTTTA-CATTTTCAATAGTATCAGAACCTTCGACCTCTAAGGTGATGG 11233 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || | ||||||||||| || ||||| Sbjct 11234 TTTTGCCAGTAAGGGTTTTTACAAAAATTTGCAT 11267 >seq7 Length=199231 Score = 125 bits (138), Expect = 5e-24 Identities = 170/233 (73%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | | || ||||| || || |||||||| |||||||| || || Sbjct 43085 ACCACCTCTCAATCTGAGAACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGA 43026 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || |||||||| || || ||||| ||||| || || ||| | || Sbjct 43025 GAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGTGG 42966 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TT 33697 | ||||||||| || ||||| |||| ||||| || | ||| || ||| || Sbjct 42965 GATACCTTCTTTATCTTGGATTTT-GGTTTTAACATTTTCAATGGTATC---TGAACCTT 42910 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | ||||| |||||||| ||||| ||||| ||||| || |||||| Sbjct 42909 CGACTTCGAGGGTGATGGTTTTACCAGTTAAAGTTTTGACAAAAATTTGCATA 42857 Score = 120 bits (132), Expect = 2e-22 Identities = 168/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| | | || ||||| || || |||||||| |||||||| || ||| Sbjct 43996 CCACCTCTCAATCTGAGGACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAG 43937 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || |||||||| || || ||||| ||||| || || ||| | || Sbjct 43936 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGTGGA 43877 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTC 33698 | ||||||||| || ||||| |||| ||| | || | ||| || ||| ||| Sbjct 43876 ATACCTTCTTTATCTTGGATTTT-AGTTTTAACGTTTTCAATGGTATC---TGAACCTTC 43821 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| |||||||| ||||| ||||| ||||| || |||||| Sbjct 43820 GACTTCGAGGGTGATGGTTTTACCAGTTAATGTTTTGACAAAAATTTGCATA 43769 >seq242 Length=49570 Score = 122 bits (134), Expect = 6e-23 Identities = 169/233 (73%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | | || ||||| ||||| |||||||| ||||||||||| || Sbjct 4062 ACCACCTCTTAATCTAAGGACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGA 4121 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || ||||||||||| |||||||| | ||| || |||||| | || Sbjct 4122 AAGAGTACGACCATCTTCTAATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTGG 4181 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TT 33697 | ||||||||| || ||||| |||| ||||| || | || || ||| || Sbjct 4182 GATACCTTCTTTATCTTGGATTTT-AGTTTTAACATTTTCAATAGTATC---TGAGCCTT 4237 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | ||||| |||||||| || | ||||| ||||| || |||||| Sbjct 4238 CAACTTCTAAGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATTTGCATA 4290 Score = 107 bits (118), Expect = 1e-18 Identities = 166/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | | || ||||| ||||| |||||||| |||||||| || || Sbjct 3606 ACCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGA 3665 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || |||||||| || |||||||| | | || |||||| | || Sbjct 3666 AAGAGTACGACCATCTTCTAATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGG 3725 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TT 33697 | |||||||||||| |||||| |||| ||| | || | || || ||| || Sbjct 3726 GATACCTTCTTTGTCTTGAATTTT-AGTTTTAACGTTTTCAATAGTATC---TGAGCCTT 3781 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | || || |||||||| ||||| ||||| || || || |||||| Sbjct 3782 CAACTTCTAAAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATA 3834 >seq86 Length=87693 Score = 113 bits (124), Expect = 3e-20 Identities = 167/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | | || ||||| ||||| |||||||| || |||||||| || Sbjct 63523 ACCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTGTAATCAGA 63464 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || |||||||| || || ||||| | ||| || || ||| | || Sbjct 63463 AAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGG 63404 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TT 33697 | |||||||||||| ||||| |||| ||||| || | ||| || ||| || Sbjct 63403 GATACCTTCTTTGTCTTGGATTTT-GGTTTTAACATTTTCAATGGTATC---TGAACCTT 63348 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | ||||| |||||||| || | ||||| ||||| || |||||| Sbjct 63347 CGACTTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAAATTTGCATA 63295 Score = 107 bits (118), Expect = 1e-18 Identities = 157/218 (72%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 33537 TAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTC 33596 ||| || ||||| ||||| |||||||| |||||||| || ||||| || || | || Sbjct 63280 TAAAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTACGACCATC 63221 Query 33597 GTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 || |||||||| ||||||||||| | ||| || |||||| | || | ||||||||| || Sbjct 63220 TTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTATC 63161 Query 33657 GGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTCCACGTCAACCGTGA 33712 ||| || |||| || | || | ||| || ||| ||| || || | |||| Sbjct 63160 TTGAATCTT-GGTTTTGACGTTTTCGATGGTATC---TGAGCCTTCGACTTCGAGGGTGA 63105 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||||||| || | ||||| || || || |||||| Sbjct 63104 TGGTTTTACCAGTAAGGGTTTTGACGAAAATTTGCATA 63067 Score = 107 bits (118), Expect = 1e-18 Identities = 166/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | | || ||||| ||||| |||||||| ||||| || || || Sbjct 63979 ACCACCTCTTAATCTGAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTATAGTCAGA 63920 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || |||||||| ||||||||||| | ||| || |||||| | || Sbjct 63919 AAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGG 63860 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TT 33697 | |||||| ||||| ||| || |||| || | || | ||| || ||| || Sbjct 63859 GATACCTTCCTTGTCTTGAATCTT-GGTTTTGACGTTTTCAATGGTATC---TGAGCCTT 63804 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | ||||| |||||||| || | ||||| ||||| || |||||| Sbjct 63803 CGACTTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAAATTTGCATA 63751 Score = 100 bits (110), Expect = 2e-16 Identities = 166/236 (70%), Gaps = 8/236 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | | || ||||| ||||| |||||||| || || || || || Sbjct 63067 ACCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTATAGTCAGA 63008 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || |||||||| || |||||||| | ||| || || ||| | || Sbjct 63007 AAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGG 62948 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TT 33697 | |||||||||||| ||||| |||| ||| | || | ||| || ||| || Sbjct 62947 GATACCTTCTTTGTCTTGGATTTT-AGTTTTAACGTTTTCAATGGTATC---TGAGCCTT 62892 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 | || |||| || || || ||||| || | ||||| ||||| || |||||| || Sbjct 62891 CTACCTCAAGGGTAATGGTCTTACCAGTAAGTGTTTTAACAAAAATTTGCATAATT 62836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328700799142080