Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq230 383 2e-101 seq213 161 1e-34 >seq230 Length=51241 Score = 383 bits (424), Expect = 2e-101 Identities = 1071/1621 (66%), Gaps = 52/1621 (3%) Strand=Plus/Plus Query 68404 GTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTT 68463 ||||| |||||||||||||| ||||| |||||| |||| |||||||||||| | Sbjct 28017 GTACGGAGATAGTACATACCAGTTTTGAGACCTTTTTTCCAAGAGTAGAAATGCATTGAT 28076 Query 68464 GTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATG 68523 || ||||| | | || |||| || || ||| || ||| | |||||||||||| || Sbjct 28077 GTAAGTTTAGCAAAAGTTGGTTCAGCAATAAAAACATTGAAACTTTGACTTTGATCAATA 28136 Query 68524 AAAGCTCCTCTATCTGCCGCCATTTTTAT-AATACTCTTTTGAGGAATTTCCCAAATAGT 68582 ||||| || | ||| || ||||| | || ||| ||||| | ||||||||||| || Sbjct 28137 AAAGCACCACGATCAGCAGCCATATCAATTAATGTTCTTT-GTCTAATTTCCCAAACTGT 28195 Query 68583 CTTAAAAATCTGTTTGATATCATCTGGAA-GGCTCGTAT--TTTGAATGGATCCACCATC 68639 || ||| | ||| | ||||||||||| || | | || ||||||| || |||| | Sbjct 28196 TTTGTAAAGTTCTTTAAGATCATCTGGAATGGATGGGATACTTTGAATTGAACCACGGTT 28255 Query 68640 GGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCT--CTCCGTTAAAACTCTA 68697 | | ||| |||||| | || | | | ||| || || |||| | | | || Sbjct 28256 GAGAACGATTTGATTCTTTAATTC-TGGTGAC-CAAATTCCTAACTCCATGAGATCTTCG 28313 Query 68698 AGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTA 68757 || || || ||| || || |||||| |||| ||| || | |||| ||||||| ||| Sbjct 28314 AGAAGTTGTTTATTGACAATAGTAAATTCACCAGCTAAAACACGACGACTGTAAATGTTA 28373 Query 68758 CTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGC 68817 |||||||||||||| | |||| || || || | |||||| | |||||||||||||||| Sbjct 28374 CTGGTATATGGTTCAAAGCATTCGTTGTTACCTAAAATTTGTGAAGTTGATGCAGTTGGC 28433 Query 68818 ATAGGTGCCACCAATAAACTATTTCTAAGACCA--TGTGTT-ATGATTTTATCTTTTAGA 68874 || ||||| | || | || | ||||||| | | || | ||||||||||| ||| Sbjct 28434 ATTGGTGCTATTAAAAGTGAGTTACGAAGACCACCTTTATTAACAATTTTATCTTTGAGA 28493 Query 68875 TGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCG 68934 | |||| | |||| ||| | |||| ||||||||| | ||||||||| ||||| || Sbjct 28494 TCAGTCCAGTTCCAACGATTTGTTGGTGTAACATTCCAGAAATCGTATTGGAGAATACCT 28553 Query 68935 TTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAA 68994 | || || ||| || ||| |||||||||| || ||||| || || || Sbjct 28554 TGGCTGGCTGGTGAACCTTTAAATGTTTCATATGGACCTTCAATAAGAGATAACTCGTGT 28613 Query 68995 CTTGCCTCTAA-TGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG-TG 69052 || || ||| ||| | ||||||| ||||| ||| | | || | || ||| | Sbjct 28614 GATG-CTGTAAGGGCAGCAAAATAAATAGTTTCTGCAATTTCAATGTTTA-ATTTTGCGG 28671 Query 69053 CTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCC 69112 | | || ||| ||||| | | | |||| || |||| || | || |||| | Sbjct 28672 CAGCGGTACCATCAAATGGCATACGAAGTTGAATGAAAACATCAGCAAGACCTTGAATAC 28731 Query 69113 CAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAAT 69172 ||||||| || || | |||||| ||| || ||| |||||| ||| ||||| || | Sbjct 28732 CAATACCAATTGGACGATGTCTTAAATTAGAGGTTTTGGCTTCTTGAACTGGATAGTAGT 28791 Query 69173 TAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGA 69232 || ||| |||||||| |||||||| | || | |||| | || | ||||| Sbjct 28792 TACGATCAATAATTTTGTTAAGATTCTTGGTAACAATTTTAGTGATTTCATAAAGTTTTT 28851 Query 69233 GAAAATCAAATCGT---------------------CCATCTAT--AACAAACATATT--- 69266 || ||||||| | || ||| | || || ||| Sbjct 28852 GATGATCAAATTCTTTTTCTTTTGGATTGGTTGAACCTTCTTTTCTACGAATGAATTTTG 28911 Query 69267 -CAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTA 69325 | || | ||||| |||||||| || || | ||||| | || ||||| || | Sbjct 28912 GTAAGGCAATGGATGCGAGATTACATACAGCAATCTCATCTGGGGATGTGTATTGAATAA 28971 Query 69326 TCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGT 69385 | || ||||| |||||||| | | ||||| || ||||| | ||||| || | Sbjct 28972 TTTCGGTACAAAGATTACTGCTGCTAATAGTACCAAGATTCTTTTGATTGGATTTAGAAT 29031 Query 69386 TACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAG 69445 |||| | || || || |||||||| || ||||||||||||| ||||| || || || | Sbjct 29032 TACAAGAATCTTTATAGAGAATAAATGGTGTACCAGTTTCAACTTGAGACTCCATGATTG 29091 Query 69446 ATTTCCAAACGACCCTAGCATTTATTAC-GGTCTTGTAACG-CTTCTCT-TTTTCATATT 69502 ||||| | ||| || ||||| |||| | || | || | | |||||||||| Sbjct 29092 CAAACCAAAGTTCTTGAGCTTTAATTACACGTCTAGCAAGGCCTGGTGTATTTTCATATT 29151 Query 69503 GTGTATATAGCCGTT--CGA-ATTCATCTCCCCAAACATCATCCAATCCAGGACATTCAT 69559 || | ||| ||| ||| ||| ||| | || || | | || ||| | Sbjct 29152 -TG-AGATA-AAGTTCACGATGTTCTTCTGAGTGAGTTTCGTCAAGACGTGGGGCTTCGT 29208 Query 69560 TTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAA 69619 | ||||| | | |||||| | | | | | |||| || ||| || |||||| | Sbjct 29209 TAGGACAAAAGAGTGACCAATCTCCGTTTTGTTCTACTCTTTCCATGAAAAGATCGCTGA 29268 Query 69620 TCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAA 69679 ||||||||| |||||||||||||| ||| ||||||| || || ||| ||||| | Sbjct 29269 CCCAAAGAGCGTAAAAGAGATCTCTGGCTCTCATTTCTTCCTTACCATGATTCTTTTTGA 29328 Query 69680 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCG 69739 | || | ||| || | |||||| || ||||||||||| ||||||| || | | | || Sbjct 29329 GTTCAATAAATTCAAAAATATCTGAGTGCCATGGTTCGAGATATACTGCAAAGGCACCTT 29388 Query 69740 GTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCG 69799 || |||| || || ||||||| || | ||||| | ||| | || | ||||| | Sbjct 29389 TTCTTTTACCACCACCTTGATCTACATAACGAGCAGTATCATTGAAAACACGGAGCATTG 29448 Query 69800 GAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATAT 69859 | | | ||||||| | ||||| || ||| |||||||||| || ||||| | Sbjct 29449 GTACCAAACCATTACTGGTGCCATTGGTACCACGAATATAACTTTGAGCGGCACGAATCT 29508 Query 69860 TACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATG 69919 || || | |||||| || ||||| ||| || |||| |||||| |||| | | Sbjct 29509 TATGGCAAGCAATACCTATACCACCTGCAGATTTTGAAATTAAAGCACATTGTTTGAGGG 29568 Query 69920 TGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTT 69979 | ||||| ||||| || || ||| ||| |||| | || | ||| || ||||||| Sbjct 29569 TATCATAAATACCATCGATTGAATCCTCTTTCATTTGAACTAAAAAGCATGAGGACATTT 29628 Query 69980 G 69980 | Sbjct 29629 G 29629 >seq213 Length=53756 Score = 161 bits (178), Expect = 1e-34 Identities = 383/569 (67%), Gaps = 20/569 (4%) Strand=Plus/Minus Query 39350 TCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTT 39409 |||||||| || ||||| | || | || || ||||||| ||||||| ||||| | Sbjct 48624 TCGAAAAAGTTTGTTTTTCTTTGGAGGGAAATCATTTCCATCCAATCAAAAGGATTTGAA 48565 Query 39410 GCATTATAtttttttttAAATCCTAATTCTGAAATCAAT---CTATCTGCAACAAATTCT 39466 |||||||| | |||||| | || ||| || | ||| | ||| ||| |||||| Sbjct 48564 GCATTATAAATCTTTTTATAACCCAAT---GAGACCAAAAGACGATCAGCACAAAATTCA 48508 Query 39467 ATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTT 39526 |||||| ||| || |||||| || || | | ||||||| || || Sbjct 48507 ATGTATTGAGACATTGAACGACTATTCATACCAATTAAATCTACTGGTAAAGAGTCACAA 48448 Query 39527 AGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGATGTTACTACCTCATC-ACT 39585 | ||| ||||||||| | ||||| ||| | || || | | | | | || | | | Sbjct 48447 ATAAATTCTTTTTCGCAAACAACGGCATCTCTAATAATGGCT-TCAAGAG-TCTTGGATT 48390 Query 39586 CG-GTGGATGCAATAAAT--GTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTC 39642 || || | | ||| | || || | | | || || || | ||||| || || || Sbjct 48389 CGAGTTTGTTTATTAATTTGGTGTATAAAAGA--CATGCAAAATTGCAATGAAGACCTTC 48332 Query 39643 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAG 39702 ||| | | ||||||||||| ||||| || | || ||||||| ||| | ||| || | Sbjct 48331 ATCACGAGAGATTAATTCGTTTGAAAAGGTTAAACCTGGCATTAAACCTCTCTTCTTTAA 48272 Query 39703 CCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAAC 39762 ||| || || | |||| ||| || ||||| || |||||||| ||||||||||| Sbjct 48271 CCAGAAAATACTACAAAAACTACCACTGAAAAAGATACCCTCTACTGCGGCAAATGCAAC 48212 Query 39763 AAGTCTCTCTCCGTAACTTGTATCA---TTATGTATCCACTTCTGTGCCCAATCAGCTTT 39819 | | ||| | || | |||| |||| ||||| || ||||||||||||||| Sbjct 48211 CAAACGTTCTGCAAAA---GAATCACTATTATTAATCCATTTTAATGCCCAATCAGCTTT 48155 Query 39820 CTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATC 39879 ||| || | ||| || || || ||||| || ||||| || | | ||||| ||| |||| Sbjct 48154 CTTTTTAATACATGGAATGGTATCTATTGCGTTAAATAGTTTACTTTTTTGCTCATTATC 48095 Query 39880 TTTAACATATGTATCTATTAACAGACTAT 39908 ||||| ||||||||| ||||| ||||||| Sbjct 48094 TTTAATATATGTATCAATTAAAAGACTAT 48066 Score = 147 bits (162), Expect = 3e-30 Identities = 217/304 (71%), Gaps = 5/304 (2%) Strand=Plus/Minus Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 |||| || || || |||||||| || || || || || ||||||||||| ||||| | || Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 |||| ||||| ||||| || | |||||| || || || |||||| ||||| Sbjct 47932 TTTGGACCTCACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCGG 47873 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTC---ATCGG-GTGTCAATTTATTC 40087 |||| ||||| || |||| |||||||| ||| |||| | || | | | || Sbjct 47872 CAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGTTGAGTTTACT-ACTC 47814 Query 40088 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCC 40147 || || |||| |||| || | ||| | |||||| ||||||||||| || ||||| Sbjct 47813 CAATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGCT 47754 Query 40148 TTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGA 40207 | ||| ||||| |||| ||||| | |||| ||||||||| | |||||||||| | | Sbjct 47753 TGTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCTATCTTTA 47694 Query 40208 TTTT 40211 |||| Sbjct 47693 TTTT 47690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686901939498360