Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq213 152 4e-32 seq45 93.3 3e-14 >seq213 Length=53756 Score = 152 bits (168), Expect = 4e-32 Identities = 390/578 (67%), Gaps = 37/578 (6%) Strand=Plus/Plus Query 43991 AGTCTTCTGATAGATACGTACATCAAAGAT---GGGCACGAGAAGCATCGATTGTTTAAT 44047 |||||| | || ||||| || || |||||| | ||| | ||| | | | ||||| Sbjct 48068 AGTCTTTTAATTGATACATATATTAAAGATAATGAGCAAAA-AAGTAA--ACTATTTAAC 48124 Query 44048 GCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT 44107 || ||||| || | || |||||| | ||||| || ||||| | |||||||| ||| Sbjct 48125 GCAATAGATACCATTCCATGTATTAAAAAGAAAGCTGATTGGGCATTAAAATGGATTAAT 48184 Query 44108 TCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTT 44167 | ||||||||||| |||||| | || || ||||| | || || || || || || Sbjct 48185 AATAGTGATTCTTTTGCAGAACGTTTGGTTGCATTTGCCGCAGTAGAGGGTATCTT--TT 48242 Query 44168 TCAG-GATCGTTTGCGGCC-ATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGA 44225 |||| | | |||| | || || ||||||||||| ||||||| ||||| || || | Sbjct 48243 TCAGTGGTAGTTTTTGTAGTATTTTCTGGTTAAAGAAGAGAGGTTTAATGCCAGGTTTAA 48302 Query 44226 CGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG-CTTG 44284 | |||||||| || ||||| |||||||||||| | |||||| ||||||| || ||| Sbjct 48303 CCTTTTCAAACGAATTAATCTCTCGTGATGAAGGTCTTCATTGCAATTTTGCATGTCTTT 48362 Query 44285 T-TACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGT 44343 | ||| | || || | || || | || ||||| || || ||| || Sbjct 48363 TATAC-ACCAAAT-TAATAAAC---AAACTCGAATCCAAGACTCTTGAAGCCATTATTAG 48417 Query 44344 AGAGGCAGTAAAGATAGAACAAGAATTTA----TGACAACAGCATTACCTGTAAATTTAA 44399 ||| || || ||| ||||||||| |||| | ||||| ||| |||||| Sbjct 48418 AGATGCCGTTGTTTGCGAAAAAGAATTTATTTGTGAC----TCTTTACCAGTAGATTTAA 48473 Query 44400 TAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTT 44459 | || |||||| | || ||| ||||| ||||||| ||| |||||| |||| Sbjct 48474 TTGGTATGAATAGTCGTTCAATGTCTCAATACATTGAATTTTGTGCTGATCGT---CTTT 48530 Query 44460 TGG---AACTGGGTTGCGATAAACA---CTATATTGTACAAAACCCGTTTGATTTTATGG 44513 ||| | |||||| ||||| | |||| || ||| || ||||||| |||| Sbjct 48531 TGGTCTCATTGGGTT---ATAAAAAGATTTATAATGCTTCAAATCCTTTTGATTGGATGG 48587 Query 44514 AAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAA 44551 ||| ||||| | || | |||||||||||||| ||| Sbjct 48588 AAATGATTTCCCTCCAAAGAAAAACAAACTTTTTCGAA 48625 Score = 113 bits (124), Expect = 4e-20 Identities = 210/303 (69%), Gaps = 9/303 (3%) Strand=Plus/Plus Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755 ||| ||||| | |||||||| |||| | || || ||| ||||| ||| ||||| | Sbjct 47700 TAGATTTGTATTATTTCCAATAAAATACCCAGATATCTGGAGTATGTATAAACAAGCAGA 47759 Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCACATTGGATTG 43814 || |||||||||||||||||| ||||| | | ||| || | | |||||| | Sbjct 47760 AGCAAGTTTTTGGACAGCAGAAGAAATTGATCTTGCACCAGATCTCAACG-ATTGGAGT- 47817 Query 43815 CATTAAA----ACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGC 43869 | |||| || | || ||| |||||||| || ||||| || || ||||| || Sbjct 47818 -AGTAAACTCAACGATAACGAACGTCATTTTATTTCCAATGTTTTAGCATTCTTTGCCGC 47876 Query 43870 GAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACC 43929 || || || || || |||||| | | | | | || | || || ||| | || Sbjct 47877 TTCTGATGGTATTGTAAACGAAAATCTTGCCACTAGATTCATGAGTGAGGTCCAAATTCC 47936 Query 43930 AGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA 43989 |||||| ||||||||||||| || |||||||| || ||||||||||| || |||| || Sbjct 47937 AGAAGCTAGATGTTTTTATGGTTTCCAAATTGCAATTGAAAATATTCACTCTGAAACTTA 47996 Query 43990 CAG 43992 ||| Sbjct 47997 CAG 47999 >seq45 Length=117154 Score = 93.3 bits (102), Expect = 3e-14 Identities = 183/271 (68%), Gaps = 6/271 (2%) Strand=Plus/Plus Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC------ 19601 ||| || ||||| || | ||||||||||| ||||| || || ||||||||||| Sbjct 17081 TTTACATATTATTATTTTCGATGAATTGGATGCAATTTGCAAACAAAGAGGTTCAAGAAG 17140 Query 19602 TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 ||| | || ||| ||| | || || |||||| | | ||| | || ||||| Sbjct 17141 TGGCGACTCAGGTGTAGGTGATTCAGTAGTTAATCAATTGTTAACAATGATTGATGGTGT 17200 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721 | | | |||||||||||||||||||| ||||| || ||| ||| | || || Sbjct 17201 AGAATCATTAAATAATATTTTAGTTATTGGTATGACCAACAGAAAGGATATGATTGATGA 17260 Query 19722 CGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATG 19781 |||||| | || || ||| | || ||| | | | |||||| ||||| |||||| Sbjct 17261 AGCCTTACTTCGTCCAGGTAGATTAGAAGTTCATGTTGAAATTTCATTACCAGATGAACA 17320 Query 19782 TGGACGTGTGGAAATTTTAAACATACATACA 19812 |||| | | ||||||| || || || ||| Sbjct 17321 TGGAAGAGAACAAATTTTCAAGATTCACACA 17351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397452129647995