Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq246 127 2e-24 seq242 127 2e-24 seq86 127 2e-24 seq7 127 2e-24 seq230 89.7 4e-13 >seq246 Length=49296 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 ||||| ||||| | || || ||||||||||||||||||||| | | || | ||| Sbjct 10600 AATACTAAATGAAGAGTTGATTCTTTTTGAATATTGTAGTCGGAAAGAGTACGACCATCT 10659 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 || | ||||||||||| |||||||||| |||||||| || || | ||| |||||||| Sbjct 10660 TCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 10719 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 ||| ||| ||| | |||| | || || | |||| ||||||| ||| || | | Sbjct 10720 TGGATTTTGGCTTTTACATTTTCGATGGTATCAGAACCTTCGACTTCTAAAGTAATGGTT 10779 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || | ||||| ||||| ||||||||| Sbjct 10780 TTACCAGTTAAGGTTTTTACAAAAATTTGCATA 10812 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 || || ||||| | ||||| ||||||||||||||||||||| | | || | ||| Sbjct 11056 AAAACTAAATGGAGGGTAGATTCTTTTTGAATATTGTAGTCGGAAAGAGTACGACCATCT 11115 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 || | ||||||||||| | || || | |||||||| || || | ||| |||||||| Sbjct 11116 TCTAATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTATCT 11175 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 ||| || ||| | |||| | ||| || | |||| || |||| || || | | Sbjct 11176 TGGATTTTAGCTTTTACATTTTCAATAGTATCAGAACCTTCGACCTCTAAGGTGATGGTT 11235 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| || || ||||| ||||| |||||||| Sbjct 11236 TTGCCAGTAAGGGTTTTTACAAAAATTTGCAT 11267 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 || || ||||| | || || |||||||||||||| |||||| | | || | ||| Sbjct 10828 AAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCGGAAAGAGTACGACCATCT 10887 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 || | ||||||||||| |||||||||| |||||||| || || | ||| ||||| || Sbjct 10888 TCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTGTCT 10947 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 ||| || ||| | |||| | || || | |||| ||||||| || |||| Sbjct 10948 TGGATTTTAGCTTTTACATTTTCGATGGTATCAGAACCTTCGACTTCTAAGGTGATAGTC 11007 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || | ||||| ||||| ||||||||| Sbjct 11008 TTACCAGTTAAGGTTTTTACAAAAATTTGCATA 11040 >seq242 Length=49570 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 || ||||| | || || ||||||||||| ||||| || | | || | ||||| Sbjct 4081 ACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCT 4140 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||||| || || |||||||||| |||||||| || || | ||| |||||||| | Sbjct 4141 AATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGG 4200 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || |||| | |||| | ||| |||| | |||||||||||| || |||| ||| Sbjct 4201 ATTTTAGTTTTAACATTTTCAATAGTATCTGAGCCTTCAACTTCTAAGGTGATAGTTTTA 4260 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || |||||||| ||||| ||||||||| Sbjct 4261 CCAGTAAGAGTTTTAACAAAAATTTGCATA 4290 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 ||||| ||||| | || || |||||||| ||||| ||||| | | || | ||| Sbjct 3850 AATACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAGAGAGTACGACCATCT 3909 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 || | |||||||| || |||| | ||| |||||||| || || | ||| |||||||| Sbjct 3910 TCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 3969 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 |||||| | || | |||| | || |||| | |||||||||||| ||| |||| | Sbjct 3970 TGAATCTTGGTCTTTACATTTTCAATTGTATCTGAGCCTTCAACTTCTAAAGTAATAGTT 4029 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || | |||||| || || ||||||||| Sbjct 4030 TTACCGGTTAAAGTTTTGACGAAAATTTGCATA 4062 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 || ||||| | || || ||||||||||| |||||||| | | || | ||||| Sbjct 3625 ACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCTTCT 3684 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||||| || |||| || | |||||||| || || | ||| ||||| || Sbjct 3685 AATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGA 3744 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || |||| | | |||| | ||| |||| | |||||||||||| ||| || | ||| Sbjct 3745 ATTTTAGTTTTAACGTTTTCAATAGTATCTGAGCCTTCAACTTCTAAAGTAATGGTTTTA 3804 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || | |||||| || || ||||||||| Sbjct 3805 CCGGTTAAAGTTTTAACGAAAATTTGCATA 3834 >seq86 Length=87693 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 || || ||||| | || || ||||||||||| |||||||| | | || | ||| Sbjct 63279 AAAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTACGACCATCT 63220 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 || | ||||||||||| |||||||||| |||||||| || || | ||| |||||||| Sbjct 63219 TCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 63160 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 |||||| |||| | | |||| | || |||| | |||| ||||| || || || | | Sbjct 63159 TGAATCTTGGTTTTGACGTTTTCGATGGTATCTGAGCCTTCGACTTCGAGGGTGATGGTT 63100 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || ||||| || || ||||||||| Sbjct 63099 TTACCAGTAAGGGTTTTGACGAAAATTTGCATA 63067 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 || ||||| | || || ||||||||||| || ||||| | | || | ||||| Sbjct 63960 ACTAAATGGAGAGTTGATTCTTTTTGAATGTTATAGTCAGAAAGAGTACGACCATCTTCT 63901 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||||||||||| |||||||||| |||||||| || || | ||| || || || Sbjct 63900 AATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCCTTGTCTTGA 63841 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | |||| | || |||| | |||| ||||| || || || | ||| Sbjct 63840 ATCTTGGTTTTGACGTTTTCAATGGTATCTGAGCCTTCGACTTCGAGGGTGATGGTTTTA 63781 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || ||||| ||||| ||||||||| Sbjct 63780 CCAGTAAGGGTTTTGACAAAAATTTGCATA 63751 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 || ||||| | || || ||||||||||||||||| || | | || | ||||| Sbjct 63504 ACTAAATGGAGAGTTGATTCTTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCT 63445 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||||| ||| |||| ||||| ||||| || || || | ||| ||||| || | Sbjct 63444 AATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTGG 63385 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || ||| |||| | |||| | || |||| |||| ||||| || || || | ||| Sbjct 63384 ATTTTGGTTTTAACATTTTCAATGGTATCTGAACCTTCGACTTCGAGGGTGATGGTTTTA 63325 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || ||||| ||||| ||||||||| Sbjct 63324 CCAGTAAGGGTTTTGACAAAAATTTGCATA 63295 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 || ||||| | || || |||||||||||||| ||||| | | || | ||||| Sbjct 63048 ACTAAATGGAGAGTTGATTCTTTTTGAATATTATAGTCAGAAAGAGTACGACCATCTTCT 62989 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||||| || |||||||||| ||||| || || || | ||| ||||| || | Sbjct 62988 AATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTGG 62929 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || |||| | | |||| | || |||| | |||| || || || || || | || Sbjct 62928 ATTTTAGTTTTAACGTTTTCAATGGTATCTGAGCCTTCTACCTCAAGGGTAATGGTCTTA 62869 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || ||||| ||||| ||||||||| Sbjct 62868 CCAGTAAGTGTTTTAACAAAAATTTGCATA 62839 >seq7 Length=199231 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 ||||| ||||| | ||||| || ||||||||||||||||| | | || | ||| Sbjct 43525 AATACTAAATGGAGAGTAGATTCCTTTTGAATATTGTAGTCAGAGAGTGTACGGCCATCT 43466 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 || | || ||||||||| |||| | ||| |||||||| || || | ||| |||||||| Sbjct 43465 TCTAATTGCTTACCGGCGAAAATTAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 43406 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 |||||| |||| | | |||| | || |||| |||| ||||| ||||| |||| | Sbjct 43405 TGAATCTTGGTTTTAACGTTTTCAATGGTATCTGAACCTTCGACTTCAAGAGTAATAGTT 43346 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || | || || ||||| ||||||||| Sbjct 43345 TTACCAGTTAATGTCTTGACAAAAATTTGCATA 43313 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 || ||||| | ||||| |||||||| ||||||||||| | | | || | ||||| Sbjct 43750 ACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAGTCTGAGAGGGTACGACCATCTTCT 43691 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||||| || || | || ||||| |||||||| || || | ||| |||||||| Sbjct 43690 AATTGTTTGCCTGCAAAGATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGA 43631 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | |||| | || |||| | |||||||||||| || |||| ||| Sbjct 43630 ATCTTGGTTTTAACGTTTTCGATGGTATCTGAGCCTTCAACTTCTAATGTAATAGTTTTA 43571 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||| || || || |||||||| Sbjct 43570 CCGGTAAGAGTCTTTACGAAAATTTGCAT 43542 >seq230 Length=51241 Score = 89.7 bits (98), Expect = 4e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 130765 AAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTC 130824 ||| |||||||| | || || | | ||||||||| || || | ||||||||| |||| Sbjct 28337 AAATTCACCAGCTAAAACACGACGACTGTAAATGTTACTGGTATATGGTTCAAAGCATTC 28396 Query 130825 GTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATT 130884 |||||| || || ||||||| || | ||| || ||||| ||| | ||| || || || Sbjct 28397 GTTGTTACCTAAAATTTGTGAAGTTGATGCAGTTGGCATTGGTGCTATTAAAAGTGAGTT 28456 Query 130885 ACGAAGACC 130893 ||||||||| Sbjct 28457 ACGAAGACC 28465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930262068488