Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq230 297 2e-75 seq317 114 2e-20 seq213 107 2e-18 >seq230 Length=51241 Score = 297 bits (328), Expect = 2e-75 Identities = 1154/1780 (65%), Gaps = 88/1780 (5%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTG-- 104279 ||||| ||||| | ||||| || | |||||||||||||| | || || || || Sbjct 29770 CCACAACACATGCTAATGCGTGTTTCTATCGGTATTCATGGTAACGATATCGACAATGCA 29711 Query 104280 --TCTTGGAGACATACGACAAGAT--GTCCCAAGGTATGTTCATTCACGCAACACCAACC 104335 |||| || ||||| || | ||| || | | | || || || |||||||| Sbjct 29710 ATTCTT----ACCTACGAGAAATTAAGTCAAAAACTCTTTACA--CATGCCACACCAACT 29657 Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAAC-AA 104394 || |||||||||||||||||| || ||||||||| ||||| ||| | || || Sbjct 29656 CTTTTCAATGCTGGTACACCATACCCACAAATGTCCTCATGCTTT-TTAGTTCAAATGAA 29598 Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454 ||||| |||||| | ||||| |||| || || | | ||||| ||| ||||| | Sbjct 29597 AGAGGATTCAATCGATGGTATTTATGATACCCTCAAACAATGTGCTTTAATTTCAAAATC 29538 Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514 || || ||||| || || |||| | | | ||| | || | |||||| || Sbjct 29537 TGCAGGTGGTATAGGTATTGCTTGCCATAAGATTCGTGCCGCTCAAAGTTATATTCGTGG 29478 Query 104515 GACAAATGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || ||||| | ||| ||||| | | |||||||| || || || || | || || Sbjct 29477 TACCAATGGC--ACCAGTAATGGTTTGGTACCAATGCTCCGTGTTTTCAATGATACTGCT 29420 Query 104573 CGCTATGTAAATCAAGCTGGGCGTC---GAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 || |||||| |||||| ||| || |||| || | | ||||| ||||| || ||| Sbjct 29419 CGTTATGTAGATCAAGGTGGTGGTAAAAGAAAAGGTGCCTTTGCAGTATATCTCGAACCA 29360 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 |||||| | ||||| | || || |||| | || || ||| | || || | Sbjct 29359 TGGCACTCAGATATTTTTGAATTTATTGAACTCAAAAAGAATCATGGTAAGGAAGAAATG 29300 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 | | | |||||||| | |||||| ||| | ||||| |||||| | ||||| || Sbjct 29299 AGAGCCAGAGATCTCTTTTACGCTCTTTGGGTCAGCGATCTTTTCATGGAAAGAGTAGAA 29240 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGC---C 104806 | | || ||||||| ||||||||||| || | || || |||| ||| | | Sbjct 29239 CAAAACGGAGATTGGTCACTCTTTTGTCCTAACGAAGCCCCACGTCTTGACGAAACTCAC 29180 Query 104807 GTGGGTGAGGAGTTTGAAGCCCTTTA-CACAAAGTACGAGGA---AGAAGGTCGGGC--G 104860 | || | |||| ||||| | |||| || || | | ||| | || | Sbjct 29179 TCAGAAGAACATCGTGAA---CTTTATCTCAAA-TATGAAAATACACCAGGCCTTGCTAG 29124 Query 104861 AC-TGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGAC 104919 || || | | |||| || | ||| || || | |||||||| || || Sbjct 29123 ACGTGTAA---TTAAAGCTCAAGAACTTTGGTTTGCAATCATGGAGTCTCAAGTTGAAAC 29067 Query 104920 TGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTT 104979 ||||||||||| || || || ||||| | ||||| || |||||||||||| | Sbjct 29066 TGGTACACCATTTATTCTCTATAAAGATTCTTGTAATTCTAAATCCAATCAAAAGAATCT 29007 Query 104980 GGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA 105039 ||| || | || ||||| ||||| ||||| | ||| ||| | |||||| Sbjct 29006 TGGTACTATTAGCAGCAGTAATCTTTGTACCGAAATTATTCAATACACATCCCCAGATGA 28947 Query 105040 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--AT--GTGGA-------- 105087 || ||||| ||||| |||||||| || || | || || | || || || Sbjct 28946 GATTGCTGTATGTAATCTCGCATCCATTGCCTTACCAAAATTCATTCGTAGAAAAGAAGG 28887 Query 105088 ---------TCCAGA-GACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAA 105137 |||| | || ||||| ||||||| || ||||||| | ||| | || |||| Sbjct 28886 TTCAACCAATCCAAAAGAAAAAGA-ATTTGATCATCAAAAACTTTATGAAATCACTAAAA 28828 Query 105138 CTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTC 105197 ||| ||||| || || |||| | |||||||| | || | || || ||| | || Sbjct 28827 TTGTTACCAAGAATCTTAACAAAATTATTGATCGTAACTACTATCCAGTTCAAGAAGCCA 28768 Query 105198 GTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTAT 105257 | |||||| | ||||| |||||||||||| | ||| |||| ||||| || ||||| | Sbjct 28767 AAACCTCTAATTTAAGACATCGTCCAATTGGTATTGGTATTCAAGGTCTTGCTGATGTTT 28708 Query 105258 TCATTCTTTGTCGCCACGCATTTGATT---CCGACGAAGCGAAGGAAATCAATGCGCGCA 105314 |||||| ||| |||||||| ||| | || || || || || | Sbjct 28707 TCATTCAACTTCGTATGCCATTTGATGGTACCGCTGCCGCAAAATTAAACATTG-----A 28653 Query 105315 TATTTGAGA--CCATGTATCACGCCGCTCTTGAGGCGAGTTCA-GAGTTGGCAGAGGTTG 105371 ||| ||| | || ||| || || ||| || | || ||||| | ||| Sbjct 28652 AATTGCAGAAACTATTTATTTTGCTGCCCTTACAGC-ATCACACGAGTTATCTCTTATTG 28594 Query 105372 ATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATA 105431 | |||||||||||||| ||| | ||||| ||||| ||||| | || |||| ||| Sbjct 28593 AAGGTCCATATGAAACATTTAAAGGTTCACCAGCCAGCCAAGGTATTCTCCAATACGATT 28534 Query 105432 TGTGGGAAGGTGAGACCAAGCT-TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAG 105490 | ||| || || | ||||| || | ||||| | |||||| || || Sbjct 28533 TCTGG-AATGTTACACCAACAAATCGTTGGAACTGGACTGATCTCAAAGATAAAATTGTT 28475 Query 105491 GAGAAGGGT---CTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCA 105547 | || ||| ||||||||| || | || || ||||||||||| || || || || Sbjct 28474 AATAAAGGTGGTCTTCGTAACTCACTTTTAATAGCACCAATGCCAACTGCATCAACTTCA 28415 Query 105548 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGA 105607 ||||| || ||||| || |||||||||||||| || || | ||||| || | | Sbjct 28414 CAAATTTTAGGTAACAACGAATGCTTTGAACCATATACCAGTAACATTTACAGTCGTCGT 28355 Query 105608 ACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATT 105667 | || || || ||| |||||||| || || || | || || |||| ||| | Sbjct 28354 GTTTTAGCTGGTGAATTTACTATTGTCAATAAACAACTTCTCGAAGATCTCATGGAGTTA 28295 Query 105668 GGTCTCTGGTC-CAAGGATATGAAGGATCTCATGGTGA--AAGCGGGTGGTTCCATTCAA 105724 || | ||||| | || || | ||| ||| || || || || |||||| |||||| Sbjct 28294 GGAATTTGGTCACCAGAAT-TAAAGAATCAAATCGTTCTCAACCG--TGGTTCAATTCAA 28238 Query 105725 AATATTGTGGATATTCCAAATGAAATTAA-GAAGTTGTACCGCACAGTTTGGGAAATCAA 105783 | ||| |||||| |||| |||| ||| || ||| |||||||||||||| | Sbjct 28237 AGTATCCCATCCATTCCAGATGATCTTAAAGAACTT-TACAAAACAGTTTGGGAAATTA- 28180 Query 105784 GATGAAGGATGTCA-TTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAA 105842 || ||| | | | |||| ||||| || ||||||||| || |||||||||||||||| Sbjct 28179 GACAAAGAACATTAATTGATATGGCTGCTGATCGTGGTGCTTTTATTGATCAAAGTCAAA 28120 Query 105843 GTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACA 105902 || | ||| | || || | ||||| | | || || | || ||||| | ||| Sbjct 28119 GTTTCAATGTTTTTATTGCTGAACCAACTTTTGCTAAACTTACATCAATGCATTTCTACT 28060 Query 105903 GTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 105942 |||||| || ||||||||||| || ||||| || ||||| Sbjct 28059 CTTGGAAAAAAGGTCTCAAAACTGGTATGTACTATCTCCG 28020 >seq317 Length=37906 Score = 114 bits (126), Expect = 2e-20 Identities = 261/384 (68%), Gaps = 9/384 (2%) Strand=Plus/Minus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGC- 9669 |||||||||||| || || | ||| |||| ||| | ||| ||||| ||||| ||| Sbjct 22885 AAAACCATCCATTTCAACTAACAATTGATTAAGAGTATTTTCACGTTCGTCATTACCGCC 22826 Query 9670 TGGCATACCACCAGCACTGCGTTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACGA 9728 || | ||||| || | ||||| | ||| ||||||||| ||||||||||| || | Sbjct 22825 TGAGAAGCCACCTTGACCTC-TTGCTCTACCAATGGCATCAATTTCATCAATGAAAACAA 22767 Query 9729 TGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCGCCCAC 9786 | |||||| ||| | | ||| | || || | ||| | || || |||| | || || Sbjct 22766 TACATGGTGCATTCTTTCTAGCTAAATCGAATAAATCTC-TA-ACTCTTGATGGACCAAC 22709 Query 9787 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9846 |||||||||||| || || || | || | || | | ||| || ||||| | ||| Sbjct 22708 ACCAACAAACATTTCAACGAAATCTGAACCTGAGGTTGAAAAGAATGGTACATTTGCTTC 22649 Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9906 ||| ||| | ||| ||| | | ||| ||||| |||||||| ||| | || | || Sbjct 22648 ACCAGCAGTTGCTTTGGCAATTAAAGTTTTACCAGTACCTGGTGGACCAACAAGAATTGC 22589 Query 9907 ACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966 ||||| |||||| || ||||| | | | || ||| || | || | ||| | || Sbjct 22588 ACCTCTTGGAATTTTAGCGCCTATATCGTGGAATTTCTTTGGATTTTTTAAAAAGTTTAC 22529 Query 9967 AATTTCTTCCAATTCATCTTTGGC 9990 || |||||| | |||| | || || Sbjct 22528 AAATTCTTCAATTTCAACCTTTGC 22505 >seq213 Length=53756 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 94736 TTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTT 94795 |||| |||||| |||||||||| |||||||| | || ||| || ||| | ||| || Sbjct 48138 TTCCATGTATTAAAAAGAAAGCTGATTGGGCATTAAAATGGATTAATA-ATAGTGA--TT 48194 Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 | ||||| || || | | |||||||| || ||||||||||| ||| |||| | Sbjct 48195 CTTTTGCAGAACGTTTGGTTGCATTTGCCGCAGTAGAGGGTATCTTTTTCAGTGGTAGTT 48254 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 | || ||||| ||| | |||||| ||||| | ||||||||| | ||| || |||| Sbjct 48255 TTTGTAGTATTTTCTGGTTAAAGAAGAGAGGTTTAATGCCAGGTTTAACCTTTTCAAACG 48314 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCA 94943 | | ||||||||||| || || || || Sbjct 48315 AATTAATCTCTCGTGATGAAGGTCTTCA 48342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583254974682760