Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq152 138 5e-28 seq29 131 8e-26 >seq152 Length=67104 Score = 138 bits (152), Expect = 5e-28 Identities = 194/268 (72%), Gaps = 6/268 (2%) Strand=Plus/Minus Query 65113 TAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATT 65172 ||||||||| ||| |||||||||||| | | |||||||| |||| || | | | Sbjct 55018 TAATAAATTTGCATTATTTGAACCAATATATTCTTGAGCCATACCGAGGATGGTGGAGTA 54959 Query 65173 TAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGC 65232 ||||||| |||||| |||||||| | || ||||| || ||||| ||| | |||||||| Sbjct 54958 TAAACTCATTTCACCATGATGATAAGCAGAGTGTTCGGAAACATAACCAATTAATTGAGC 54899 Query 65233 AACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCA-GAATACAATATTTTCCGTAAAC 65291 |||||| ||||| || ||||||| |||| || ||| ||||| | ||||| | | | Sbjct 54898 AACTTTAATTTCTTTTTTTAAATTTCTTTTGAA-GCATGAATAAAGAATTTTTCTTTGAG 54840 Query 65292 TAATTTTCAATCCATCCATTAAATT--AGGAATGCTTCTGTCACAATCATATTTTGAGAA 65349 |||| || ||||| | |||| |||||| ||| |||||||| | ||||| Sbjct 54839 AGGTTTTTAAACCATCAAC--AATTGAAGGAATTGATCTTTCACAATCGGCAATAGAGAA 54782 Query 65350 ATGTATGAATTCTTTGTTAATAAATTCT 65377 || ||||||||||| ||||| ||| Sbjct 54781 TAAAATCAATTCTTTGTTGATAAAGTCT 54754 >seq29 Length=138075 Score = 131 bits (144), Expect = 8e-26 Identities = 310/468 (66%), Gaps = 3/468 (1%) Strand=Plus/Minus Query 64913 CCATTTATTAAAATCATCGGAATAATTGGTGCATAAAAGATAGGCTCAACAATGAGACCA 64972 ||||| | ||||| ||| || ||||||||| |||| | |||| || | ||| Sbjct 82803 CCATTAACTAAAACCATTGGGATAATTGGTACATAGTAATCTGGCTGAATAGATTCACCC 82744 Query 64973 TCATCATCCAAATACTTCAAAATGGCATCATCCTCTTTTGGAAATATAGAACGAGTTATT 65032 || || || | ||| || || | ||||||||| || ||| | | ||| | ||| Sbjct 82743 TCTTCTTCAAGATAGTTTAAGAGAGCATCATCCATTTCATTAAAGAGATGACGTGAAATT 82684 Query 65033 TTATTCAATTGAGTATAAATATATCTTTCGGATGCGTGGTCTTGTCCAGTTCGT---CGT 65089 | | || ||| ||||||||||| | ||||| || | ||| | || || Sbjct 82683 GGTTCGAGTTTAGTGAAAATATATCTTGCAGATGCTGAATCATCACCACCTTGTAAACGA 82624 Query 65090 GTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGA 65149 || || || |||||| || ||||||| ||||| |||||||||| |||||| || Sbjct 82623 GTACCGAATTGACCAGAGGGTGTTAATAATGGTATATTATTTGAACCAACAAAATTATGT 82564 Query 65150 GCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCA 65209 |||||| ||||||| || |||||| ||||||||||||||| || || ||| Sbjct 82563 GCCATTTTAATAATTGTTGAATTTAATGATTGTTCACCGTGATGATAAGATGTTTGCTCA 82504 Query 65210 GAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCA 65269 | ||||| ||| | ||| | ||||| ||||| | |||||| || |||| | Sbjct 82503 GCTACATAACCAGAGAGTTGCGATACTTTAATTTCAGAAGTTAAACGACGCTTGAATGAA 82444 Query 65270 GAATACAATATTTTCCGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTG 65329 | | | || ||||| ||| || ||| || ||||| |||||| ||||||||||| Sbjct 82443 GCAAATAAAATTTTACGTTGACCTGGTTTTAAGCCATCAATTAAAGATGGAATGCTTCTA 82384 Query 65330 TCACAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTCT 65377 | | || |||||| || || || ||||||||||| ||| Sbjct 82383 ATATTAGCAGCCCAACTGAAATGGATTAACTCCTTGTTAATAAAGTCT 82336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235677704992350