Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq86 163 3e-35 seq242 159 4e-34 seq7 145 9e-30 seq14 129 7e-25 seq20 114 1e-20 >seq86 Length=87693 Score = 163 bits (180), Expect = 3e-35 Identities = 166/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG--- 27459 || |||||||| ||||| || || ||||| || ||||| ||||| |||||||| || Sbjct 62837 ATTATGCAAATTTTTGTTAAAACACTTACTGGTAAGACCATTACCCTTGAGGTAGAAGGC 62896 Query 27460 TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519 |||| ||| ||||| ||| | || ||||||| || ||||| || || || || ||| Sbjct 62897 TCAG---ATACCATTGAAAACGTTAAAACTAAAATCCAAGACAAAGAAGGTATCCCACCA 62953 Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGAC 27579 ||||| || ||||| |||||||||||||| ||| | || |||| |||||| || | ||| Sbjct 62954 GACCAACAACGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGAC 63013 Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||||| | ||||| ||||| ||||| ||| |||| Sbjct 63014 TATAATATTCAAAAAGAATCAACTCTCCATTTAGT 63048 >seq242 Length=49570 Score = 159 bits (176), Expect = 4e-34 Identities = 174/230 (76%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG---TCA 27462 |||||||| || ||||| || | ||||| || ||||||||| | || ||||| ||| Sbjct 4061 ATGCAAATTTTCGTCAAAACTTTAACCGGTAAAACTATTACTTTAGAAGTTGAAGGCTCA 4002 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | ||| |||| |||| | ||| | || ||||| || || || || || || ||||| Sbjct 4001 G---ATACAATTGAAAATGTAAAGACCAAGATTCAAGATAAAGAAGGTATCCCACCAGAT 3945 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || ||| |||||||||||||||| ||| | || |||| |||||| || | |||||| Sbjct 3944 CAACAACGTTTAATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTAT 3885 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| ||||||| ||||| ||||| ||| |||| || | ||||| ||||| Sbjct 3884 AATATCCAAAAAGAATCAACTCTCCATTTAGTATTAAGACTTCGTGGTGG 3835 Score = 159 bits (176), Expect = 4e-34 Identities = 176/233 (76%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || |||||||| ||||| || || ||||| |||||||| |||||| | || || || | Sbjct 4748 ATTATGCAAATTTTTGTTAAAACTCTTACTGGCAAGACCATTACTTTAGAAGTAGA---A 4692 Query 27463 GG---TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519 || ||||| ||||| |||| | ||| | ||||| || || || || |||||||| ||| Sbjct 4691 GGCTCTGATACCATTGAAAATGTAAAGACCAAAATCCAAGATAAAGAAGGAATTCCACCA 4632 Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGAC 27579 || || || | || |||||||||||||| ||| | || |||| |||||| || | ||| Sbjct 4631 GATCAACAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGAC 4572 Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||||||| ||||| ||||| ||| |||| || | || || ||||| Sbjct 4571 TACAACATCCAAAAAGAATCAACTCTCCATTTAGTATTAAGACTCCGTGGTGG 4519 Score = 127 bits (140), Expect = 2e-24 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG---TCA 27462 |||||||| ||||| || || ||||| || || || ||||| || || || || ||| Sbjct 4517 ATGCAAATTTTTGTTAAAACCCTTACTGGTAAAACCATTACCCTCGAAGTCGAAGGCTCA 4458 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | ||| |||| ||| | || | ||||| || || || || || || || ||||| Sbjct 4457 G---ATACAATTGAAAACGTCAAAACCAAAATCCAAGATAAAGAAGGTATCCCACCAGAT 4401 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || | || |||||||||||||| ||| | || |||| |||||| || | |||||| Sbjct 4400 CAACAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTAT 4341 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 ||| ||||||| ||||| ||||| ||| |||| Sbjct 4340 AATATCCAAAAAGAATCAACTCTCCATTTAGT 4309 >seq7 Length=199231 Score = 145 bits (160), Expect = 9e-30 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| | || || || |||||||||||||| || || |||| Sbjct 43314 ATGCAAATTTTTGTCAAGACATTAACTGGTAAAACTATTACTCTTGAAGTCGA---AGGT 43370 Query 27466 ---GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| ||||| ||| | || | || ||||| || || || || || || ||||| Sbjct 43371 TCAGATACCATTGAAAACGTTAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGAT 43430 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || ||| ||||||| || ||||||||| | || |||| ||||| || | ||||| Sbjct 43431 CAACAACGTTTAATTTTCGCCGGTAAGCAATTAGAAGATGGCCGTACACTCTCTGACTAC 43490 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 ||| | ||||||||||| ||||| ||| |||| || Sbjct 43491 AATATTCAAAAGGAATCTACTCTCCATTTAGTATT 43525 Score = 136 bits (150), Expect = 5e-27 Identities = 158/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG- 27464 |||||||| |||||||| || | || || || || ||||||||||| ||||| ||| Sbjct 43086 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATTACTCTTGAAGTTGA---AGGC 43142 Query 27465 --TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| ||| | || | || | || ||||| || || || || || || |||||| Sbjct 43143 TCAGATACCATCGAGAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGAC 43202 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || ||| |||||||||| ||||| ||| | || || | |||||| || |||| ||| Sbjct 43203 CAACAACGTTTAATTTTTGCAGGTAAACAATTAGAAGACGGTCGTACTCTCTCAGATTAT 43262 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 ||| ||||||| ||||| ||||| ||| |||| Sbjct 43263 AATATCCAAAAAGAATCTACTCTCCATTTAGT 43294 >seq14 Length=162200 Score = 129 bits (142), Expect = 7e-25 Identities = 133/173 (77%), Gaps = 6/173 (3%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG--- 27459 || |||||||| ||||| || || ||||| || ||||| ||||| |||||||| || Sbjct 64408 ATTATGCAAATTTTTGTTAAAACACTTACTGGTAAGACCATTACCCTTGAGGTAGAAGGC 64349 Query 27460 TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519 |||| ||| ||||| ||| | || ||||||| || ||||| || || || || ||| Sbjct 64348 TCAG---ATACCATTGAAAACGTTAAAACTAAAATCCAAGACAAAGAAGGTATCCCACCA 64292 Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT 27572 ||||| || ||||| |||||||||||||| ||| | || |||| |||||| || Sbjct 64291 GACCAACAACGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCT 64239 >seq20 Length=149080 Score = 114 bits (126), Expect = 1e-20 Identities = 148/203 (73%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGT---GATAGCATTGCAAATTTGAAGGCT 27489 || || || || ||||| || ||||| |||| |||| ||| | ||| | |||||| Sbjct 74685 GGTAAAACCATCACTCTCGAAGTTGA---AGGTTCAGATACCATCGAAAACGTCAAGGCT 74629 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 ||||| || ||||| || || || || || ||||| || ||| |||| || || ||||| Sbjct 74628 AAAATCCAAGACAAAGAAGGTATCCCACCTGACCAACAACGTTTAATCTTCGCCGGTAAA 74569 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||| | || |||| ||||||| || ||| || ||| | ||||| ||||| || || || Sbjct 74568 CAATTAGAAGATGGTCGTACCTTACAAGATTACAATATTCAAAAAGAATCAACCCTCCAC 74509 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| | ||| | ||||| Sbjct 74508 TTAGTCTTAAGACTTAGAGGTGG 74486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570304704024880