Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq86 132 3e-26 seq7 132 3e-26 seq242 123 2e-23 seq246 107 1e-18 seq20 86.0 4e-12 >seq86 Length=87693 Score = 132 bits (146), Expect = 3e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || ||||||||||| || |||||||||||||| || ||||| || || | ||||| Sbjct 63960 ACTAAATGGAGAGTTGATTCTTTTTGAATGTTATAGTCAGAAAGAGTACGACCATCTTCT 63901 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||||||||| || | ||| ||||| || || || | || ||||||||| || Sbjct 63900 AATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCCTTGTCT-TG 63842 Query 34618 ATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | || ||||| ||| | ||| || ||| || || ||||| | ||| || ||||| Sbjct 63841 AATCTTGGTTTTGACGTTTTCAATGGTATCTGAGCCTTCGACTTCGAGGGTGATGGTTTT 63782 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || | ||||| |||||||| ||||| Sbjct 63781 ACCAGTAAGGGTTTTGACAAAAATTTGCAT 63752 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || ||||||||||| || |||||||| ||||| || ||||| || || | ||||| Sbjct 63048 ACTAAATGGAGAGTTGATTCTTTTTGAATATTATAGTCAGAAAGAGTACGACCATCTTCT 62989 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| ||||| || | ||| |||||||| || || | || || |||||| | Sbjct 62988 AATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTGG 62929 Query 34618 ATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 || ||| ||||||||| | ||| || ||| || || || || | ||| || || || Sbjct 62928 AT-TTTAGTTTTAACGTTTTCAATGGTATCTGAGCCTTCTACCTCAAGGGTAATGGTCTT 62870 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || | ||||| |||||||| ||||| Sbjct 62869 ACCAGTAAGTGTTTTAACAAAAATTTGCAT 62840 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || ||||||||||| || |||||||| || ||||| ||||| || || | ||||| Sbjct 63504 ACTAAATGGAGAGTTGATTCTTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCT 63445 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| || || || | ||| |||||||| || || | || || |||||| | Sbjct 63444 AATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTGG 63385 Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 || ||| |||||||| | ||| || ||| | || ||||| | ||| || ||||| Sbjct 63384 AT-TTTGGTTTTAACATTTTCAATGGTATCTGAACCTTCGACTTCGAGGGTGATGGTTTT 63326 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || | ||||| |||||||| ||||| Sbjct 63325 ACCAGTAAGGGTTTTGACAAAAATTTGCAT 63296 Score = 107 bits (118), Expect = 1e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || || ||||||||||| || ||||||||||| || || || || || || | ||| Sbjct 63279 AAAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAGAGAGTACGACCATCT 63220 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||||||||||||||| || | ||| ||||| || || || | || || || ||| Sbjct 63219 TCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 63160 Query 34615 GTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGT 34673 ||| || ||||| ||| | || || ||| || || ||||| | ||| || || Sbjct 63159 -TGAATCTTGGTTTTGACGTTTTCGATGGTATCTGAGCCTTCGACTTCGAGGGTGATGGT 63101 Query 34674 TTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| || | ||||| || ||||| ||||| Sbjct 63100 TTTACCAGTAAGGGTTTTGACGAAAATTTGCAT 63068 >seq7 Length=199231 Score = 132 bits (146), Expect = 3e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || ||||||||||| || ||||| || ||||||||||| || || || ||||||| Sbjct 43294 ACTAAATGGAGAGTAGATTCTTTTTGGATATTATAATCTGAGAGAGTACGACCGTCTTCT 43235 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| ||||| |||||||| |||||||| || || | || || || ||| || Sbjct 43234 AATTGTTTACCTGCAAAAATTAAACGTTGTTGGTCTGGTGGGATACCTTCTTTATCT-TG 43176 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | || ||||| ||| | || || ||| || || ||||| | || || ||||| Sbjct 43175 AATCTTGGTTTTGACGTTCTCGATGGTATCTGAGCCTTCAACTTCAAGAGTAATGGTTTT 43116 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| ||||| ||||| |||||||| ||||| Sbjct 43115 ACCAGTTAAAGTTTTGACAAAAATTTGCAT 43086 Score = 122 bits (134), Expect = 5e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| | | || || ||||||||||| ||||||||||| || || || || Sbjct 43541 GCCACCTCTTAATCTTAATACTAAATGGAGAGTAGATTCCTTTTGAATATTGTAGTCAGA 43482 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||||| || | ||||| | ||| |||||||| || |||||||| ||||| || || || Sbjct 43481 GAGTGTACGGCCATCTTCTAATTGCTTACCGGCGAAAATTAAACGTTGTTGATCTGGTGG 43422 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCA 34657 | || || || ||| ||| || ||||||||| | ||| || ||| | || | Sbjct 43421 GATACCTTCTTTATCT-TGAATCTTGGTTTTAACGTTTTCAATGGTATCTGAACCTTCGA 43363 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || |||||||| ||||| || || |||||||| ||||| Sbjct 43362 CTTCAAGAGTAATAGTTTTACCAGTTAATGTCTTGACAAAAATTTGCAT 43314 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || |||||||| || || ||||| || || || ||||| || || || | ||||| Sbjct 43750 ACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAGTCTGAGAGGGTACGACCATCTTCT 43691 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | |||||| || ||||| || | ||| ||||| || || || | || || || ||| Sbjct 43690 AATTGTTTGCCTGCAAAGATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGA 43631 Query 34618 ATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||||| ||||||||| | || || ||| || || ||||| | || || ||||| Sbjct 43630 ATCTTG-GTTTTAACGTTTTCGATGGTATCTGAGCCTTCAACTTCTAATGTAATAGTTTT 43572 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||||| | || || || ||||| |||||| Sbjct 43571 ACCGGTAAGAGTCTTTACGAAAATTTGCATG 43541 >seq242 Length=49570 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || ||||||||||| || ||||||||||| || || ||||| || || | ||||| Sbjct 3625 ACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCTTCT 3684 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| ||||| || | | ||||| || || || | || || |||||| || Sbjct 3685 AATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTGTCT-TG 3743 Query 34618 ATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||| ||||||||| | ||| || ||| || || ||||| | || || ||||| Sbjct 3744 AATTTTAGTTTTAACGTTTTCAATAGTATCTGAGCCTTCAACTTCTAAAGTAATGGTTTT 3803 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||||| ||||| || ||||| ||||| Sbjct 3804 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 3833 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || ||||||||||| || ||||||||||| ||||| ||||| || || | ||||| Sbjct 4081 ACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCT 4140 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | |||||| || ||||| || | ||| ||||| || || || | || || || ||| | Sbjct 4141 AATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGG 4200 Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 || ||| |||||||| | ||| || ||| || || ||||| | ||| || ||||| Sbjct 4201 AT-TTTAGTTTTAACATTTTCAATAGTATCTGAGCCTTCAACTTCTAAGGTGATAGTTTT 4259 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || | ||||| |||||||| ||||| Sbjct 4260 ACCAGTAAGAGTTTTAACAAAAATTTGCAT 4289 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || || ||||||||||| || ||||| || ||||| || || || || || | ||| Sbjct 3850 AATACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAGAGAGTACGACCATCT 3909 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||||||||| ||||| |||||||| ||||| || || || | || || || ||| Sbjct 3910 TCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 3969 Query 34615 GTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTT 34674 ||||| |||| | |||||| ||| || || ||||| | || || ||| Sbjct 3970 TGAATCTTGGTCTTTACATTTTCAATTGTATCTGAGCCTTCAACTTCTAAAGTAATAGTT 4029 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||||||| ||||| || ||||| ||||| Sbjct 4030 TTACCGGTTAAAGTTTTGACGAAAATTTGCAT 4061 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || ||||||||||| || ||||| || ||||| || ||||| || || | ||||| Sbjct 4309 ACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAAAGAGTACGACCATCTTCT 4368 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| ||||| || | | ||||| || || || | || || || ||| | Sbjct 4369 AATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTATCTTGG 4428 Query 34618 ATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 || ||| ||||| ||| | |||||| ||| || || ||||| | ||| || ||||| Sbjct 4429 AT-TTTGGTTTTGACGTTTTCAATTGTATCTGAGCCTTCGACTTCGAGGGTAATGGTTTT 4487 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || | ||||| |||||||| ||||| Sbjct 4488 ACCAGTAAGGGTTTTAACAAAAATTTGCAT 4517 >seq246 Length=49296 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || || ||||| ||||| || |||||||| ||||| || ||||| || || | ||| Sbjct 10828 AAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCGGAAAGAGTACGACCATCT 10887 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||||||||||||||| || | ||| ||||| || || || | || || |||||| Sbjct 10888 TCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTGTCT 10947 Query 34615 GTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTT 34674 ||| || ||||| | || || || | || ||||| | ||| || || Sbjct 10948 TGGATTTTAGCTTTTACATTTTCGATGGTATCAGAACCTTCGACTTCTAAGGTGATAGTC 11007 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| ||||| ||||| |||||||| ||||| Sbjct 11008 TTACCAGTTAAGGTTTTTACAAAAATTTGCAT 11039 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || || ||||| ||||| || |||||||| || || || ||||| || || | ||| Sbjct 10600 AATACTAAATGAAGAGTTGATTCTTTTTGAATATTGTAGTCGGAAAGAGTACGACCATCT 10659 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||||||||||||||| || | ||| ||||| || || || | || || || ||| Sbjct 10660 TCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 10719 Query 34615 GTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTT 34674 ||| || ||||| | || || || | || ||||| | || || ||| Sbjct 10720 TGGATTTTGGCTTTTACATTTTCGATGGTATCAGAACCTTCGACTTCTAAAGTAATGGTT 10779 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| ||||| ||||| |||||||| ||||| Sbjct 10780 TTACCAGTTAAGGTTTTTACAAAAATTTGCAT 10811 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || || |||||||| || || |||||||| || || || ||||| || || | ||| Sbjct 11056 AAAACTAAATGGAGGGTAGATTCTTTTTGAATATTGTAGTCGGAAAGAGTACGACCATCT 11115 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | ||||||||||||||| || | | ||||| || || || | || || || ||| Sbjct 11116 TCTAATTGTTTACCGGCAAAGATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTTATCT 11175 Query 34615 GTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTT 34674 ||| || ||||| | ||| || || | || || || | ||| || ||| Sbjct 11176 TGGATTTTAGCTTTTACATTTTCAATAGTATCAGAACCTTCGACCTCTAAGGTGATGGTT 11235 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || || || | ||||| |||||||| |||||||| Sbjct 11236 TTGCCAGTAAGGGTTTTTACAAAAATTTGCATGTT 11270 >seq20 Length=149080 Score = 86.0 bits (94), Expect = 4e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT-GA 34538 || |||||||| | || || || ||||| || || |||||||| || |||||| | Sbjct 74486 CCACCTCTAAGTCTTAAGACTAAGTGGAGGGTTGATTCTTTTTGAATATTGTAATCTTGT 74545 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | ||||| | |||||||||||| || |||||||| |||||||| || || Sbjct 74546 AAG-GTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGGTCAGGTGG 74604 Query 34599 CACTCCCTCCTTGTCTGTGATCTT 34622 | || || |||||| ||| || Sbjct 74605 GATACCTTCTTTGTCTTGGATTTT 74628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314726535222167