Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq7 136 3e-27 seq246 129 5e-25 seq242 125 6e-24 seq86 122 8e-23 seq20 105 6e-18 seq14 100 2e-16 >seq7 Length=199231 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || | || || || |||||||||||||||| ||| || Sbjct 43314 ATGCAAATTTTTGTCAAGACATTAACTGGTAAAACTATTACTCTTGAAGTCGAAGGTTCA 43373 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| || |||||||| |||||||| || ||||| |||||| Sbjct 43374 GATACCATTGAAAACGTTAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 43433 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||| | |||||| || ||||| ||||| | || | || || ||||| Sbjct 43434 CAACGTTTAATTTTCGCCGGTAAGCAATTAGAAGATGGCCGTACACTCTCTGACTACAAT 43493 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| || || | ||||| || || | || | |||||||| Sbjct 43494 ATTCAAAAGGAATCTACTCTCCATTTAGTATTAAGATTAAGAGGTGGCAT 43543 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| | || || || | |||||||||||||| ||| || Sbjct 43086 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAAGGCTCA 43145 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| |||||| || |||||||| |||||||| || ||||| || ||| Sbjct 43146 GATACCATCGAGAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAA 43205 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||| | || || |||||||| |||||| || || | || ||||| || Sbjct 43206 CAACGTTTAATTTTTGCAGGTAAACAATTAGAAGACGGTCGTACTCTCTCAGATTATAAT 43265 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || ||||| || || || | ||||| || Sbjct 43266 ATCCAAAAAGAATCTACTCTCCATTTAGT 43294 Score = 123 bits (136), Expect = 2e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || ||||| ||||| ||||| || ||||||| | ||||| ||| || Sbjct 43541 CATGCAAATTTTCGTAAAGACTCTTACCGGTAAAACTATTACATTAGAAGTTGAAGGCTC 43600 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | || ||| || |||||||| |||||||| || ||||| ||||| Sbjct 43601 AGATACCATCGAAAACGTTAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCA 43660 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| ||| | || | || ||||||||||| ||||| || ||| | || || ||||| Sbjct 43661 ACAACGTCTTATCTTTGCAGGCAAACAATTAGAAGATGGTCGTACCCTCTCAGACTACAA 43720 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || ||||| || || ||| | ||||| ||| Sbjct 43721 TATCCAAAAAGAATCTACCCTCCATTTAGTT 43751 >seq246 Length=49296 Score = 129 bits (142), Expect = 5e-25 Identities = 178/247 (72%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||||||||| | || || ||| |||| || | ||||| ||| || Sbjct 11039 ATGCAAATTTTTGTAAAAACCTTAACTGGTAAGACTATCACCTTAGAAGTCGAAGGTTCT 10980 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| ||||| |||||||||||||| || ||||| |||||| Sbjct 10979 GATACCATCGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATCAA 10920 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||||| |||||||| ||||| || || ||||||| || || Sbjct 10919 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTATAAT 10860 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 |||||||| || || || | ||||| ||||| | | || ||||| || ||| | | Sbjct 10859 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGACTTCGTGGTGGTAT-GCAA--ATT 10803 Query 27228 TTTGTAA 27234 ||||||| Sbjct 10802 TTTGTAA 10796 Score = 127 bits (140), Expect = 2e-24 Identities = 186/260 (72%), Gaps = 5/260 (2%) Strand=Plus/Minus Query 26975 TAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGA 27034 ||||||| | |||||| || ||||||||||| || || ||||| | || || | || Sbjct 11278 TAATTTAAAA--CATGCAAATTTTTGTAAAAACCCTTACTGGCAAAACCATCACCTTAGA 11221 Query 27035 AGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCAT 27094 || ||| || || | ||||| | || ||| ||||| ||||| |||||||| || Sbjct 11220 GGTCGAAGGTTCTGATACTATTGAAAATGTAAAAGCTAAAATCCAAGATAAAGAAGGTAT 11161 Query 27095 ACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGT 27154 ||||| |||||||| | | || | ||||| |||||||| ||||| || || | Sbjct 11160 CCCACCAGATCAACAAAGACTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCT 11101 Query 27155 TTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||| ||||| |||||||| || || ||| | ||||| ||||| | | || ||||| Sbjct 11100 TTCCGACTACAATATTCAAAAAGAATCTACCCTCCATTTAGTTTTAAGACTTCGTGGTGG 11041 Query 27215 CATAACAAACACTTTTGTAA 27234 || ||| | |||||||| Sbjct 11040 TAT-GCAA--ATTTTTGTAA 11024 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||||||||| | || || || | |||||| | ||||| ||| || Sbjct 10811 ATGCAAATTTTTGTAAAAACCTTAACTGGTAAAACCATTACTTTAGAAGTCGAAGGTTCT 10752 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| ||||| ||||| |||||||| || ||||| |||||| Sbjct 10751 GATACCATCGAAAATGTAAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 10692 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||||| |||||||| ||||| || || ||||||| ||||| Sbjct 10691 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTACAAT 10632 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 |||||||| || || || | ||||| || || Sbjct 10631 ATTCAAAAAGAATCAACTCTTCATTTAGTATT 10600 >seq242 Length=49570 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||||| || || || |||| || | ||||| ||| || Sbjct 4289 ATGCAAATTTTTGTTAAAACTCTTACTGGTAAAACTATCACCTTAGAAGTTGAAGGCTCA 4230 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||| ||||| |||||||| || ||||| |||||| Sbjct 4229 GATACTATTGAAAATGTTAAAACTAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 4170 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || || |||||||| ||||| || || |||| ||||||||| Sbjct 4169 CAACGTCTCATTTTTGCAGGAAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 4110 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 |||||||| || || || | ||||| || Sbjct 4109 ATTCAAAAAGAATCAACTCTCCATTTAGT 4081 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| | ||||| || | |||||| | ||||| ||| || Sbjct 3833 ATGCAAATTTTCGTTAAAACTTTAACCGGTAAAACCATTACTTTAGAAGTTGAAGGCTCA 3774 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||||||||||| || ||||| |||||| Sbjct 3773 GATACTATTGAAAACGTTAAAACTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCAA 3714 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || |||||||| ||||| || || |||| || |||||| Sbjct 3713 CAAAGACTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTACAAC 3654 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 |||||||| || || || | ||||| ||| Sbjct 3653 ATTCAAAAAGAATCAACTCTCCATTTAGTT 3624 >seq86 Length=87693 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || || || | || || || ||||| ||| || Sbjct 63296 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 63355 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||| |||||||||||||| || ||||| || ||| Sbjct 63356 GATACCATTGAAAATGTTAAAACCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 63415 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| || |||||||| ||||| || || |||| |||||||| Sbjct 63416 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAT 63475 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 |||||||| || || || | ||||| ||| Sbjct 63476 ATTCAAAAAGAATCAACTCTCCATTTAGTT 63505 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || || || | || || || ||||| ||| || Sbjct 63752 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63811 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| || ||||||||||| ||||| || ||||| |||||| Sbjct 63812 GATACCATTGAAAACGTCAAAACCAAGATTCAAGACAAGGAAGGTATCCCACCAGATCAA 63871 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||||| |||||||| ||||| || || |||| || || ||| Sbjct 63872 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATAAC 63931 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 |||||||| || || || | ||||| ||| Sbjct 63932 ATTCAAAAAGAATCAACTCTCCATTTAGTT 63961 Score = 118 bits (130), Expect = 9e-22 Identities = 163/229 (71%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 26969 ATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTAC 27028 ||||||||||| ||||| || ||||| ||||| || || || ||| | ||||| Sbjct 62829 ATTTTTTAATT--------ATGCAAATTTTTGTTAAAACACTTACTGGTAAGACCATTAC 62880 Query 27029 TCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGA 27088 ||||| || ||| || || | ||||| | || ||| ||||| ||||||||||| Sbjct 62881 CCTTGAGGTAGAAGGCTCAGATACCATTGAAAACGTTAAAACTAAAATCCAAGACAAAGA 62940 Query 27089 AGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTC 27148 ||| || ||||| || ||||| ||| | || | || || |||||||| ||||| || Sbjct 62941 AGGTATCCCACCAGACCAACAACGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGTCG 63000 Query 27149 GACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || |||| || || || |||||||| || || || | ||||| ||| Sbjct 63001 TACTCTTTCTGACTATAATATTCAAAAAGAATCAACTCTCCATTTAGTT 63049 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || || || || | || || || ||||| ||| || Sbjct 63068 ATGCAAATTTTCGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63127 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | |||||| || |||||||| |||||||| || ||||| |||||| Sbjct 63128 GATACCATCGAAAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 63187 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||||| |||||||| ||||| || || | || || |||||| Sbjct 63188 CAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACAAC 63247 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | ||||| ||||| | | || ||||| || Sbjct 63248 ATTCAAAAAGAATCAACTCTCCATTTAGTTTTAAGACTCCGTGGTGGTAT 63297 >seq20 Length=149080 Score = 105 bits (116), Expect = 6e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 || ||||| ||||| ||| || || | || || | ||||| ||||| |||||| Sbjct 74676 ATCACTCTCGAAGTTGAAGGTTCAGATACCATCGAAAACGTCAAGGCTAAAATCCAAGAC 74617 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 |||||||| || ||||| || ||||| |||||||| | |||||| |||||||| ||||| Sbjct 74616 AAAGAAGGTATCCCACCTGACCAACAACGTTTAATCTTCGCCGGTAAACAATTAGAAGAT 74557 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 || ||| | |||||||| |||||||| || || ||| | || || || || Sbjct 74556 GGTCGTACCTTACAAGATTACAATATTCAAAAAGAATCAACCCTCCACTTAGTCTT 74501 >seq14 Length=162200 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || || ||| | ||||| ||||| || ||| || Sbjct 64405 ATGCAAATTTTTGTTAAAACACTTACTGGTAAGACCATTACCCTTGAGGTAGAAGGCTCA 64346 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||| |||||||||||||| || ||||| || ||| Sbjct 64345 GATACCATTGAAAACGTTAAAACTAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 64286 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 || ||| | || | || || |||||||| ||||| Sbjct 64285 CAACGTCTCATTTTTGCTGGTAAACAATTAGAAGA 64251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434914056252480