Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq242 100 2e-16 seq7 98.7 7e-16 seq86 89.7 4e-13 seq246 84.2 2e-11 >seq242 Length=49570 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| |||||||||||||| ||| ||| || | || || ||| || | Sbjct 4289 ATGCAAATTTTTGTTAAAACTCTTACTGGTAAAACTATCACCTTAGAAGTTGAAGGCTCA 4230 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || ||| ||||| || ||||||||| | || || | Sbjct 4229 GATACTATTGAAAAT--GTTAAAACTAAAATCCAAGATAAAGAAGGTATCCCACCAGATC 4172 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | |||||||| ||||||||||| || || | || | | || ||||||| Sbjct 4171 AACAACGTCTCATTTTTGCAGGAAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACA 4112 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 |||| |||||||| ||| | ||||| || Sbjct 4111 ACATTCAAAAAGAATCAACTCTCCATTTAGT 4081 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 10/215 (5%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| ||||| |||||||| ||| ||||| | || |||||| || | Sbjct 4517 ATGCAAATTTTTGTTAAAACCCTTACTGGTAAAACCATTACCCTCGAAGTCGAAGGCTCA 4458 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 || |||||| | |||||| ||||| || ||||||||| | || | Sbjct 4457 GA-----TACAATTGAAAACGTCAAAACCAAAATCCAAGATAAAGAAGGTATCCCACCAG 4403 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||| | | |||||||| || |||||||| || || | || | | || || | Sbjct 4402 ATCAACAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACT 4343 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 | || ||||||||||| ||| | ||||| ||| Sbjct 4342 ATAATATCCAAAAAGAATCAACTCTCCATTTAGTT 4308 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| |||||||||||||| || ||||| | || || ||| || | Sbjct 4745 ATGCAAATTTTTGTTAAAACTCTTACTGGCAAGACCATTACTTTAGAAGTAGAAGGCTCT 4686 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || || ||||| || |||||||| |||| || | Sbjct 4685 GATACCATTGAAAAT--GTAAAGACCAAAATCCAAGATAAAGAAGGAATTCCACCAGATC 4628 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||| | | |||||||| || |||||||| || || | || | | || || |||| Sbjct 4627 AACAAAGACTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACA 4568 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 ||||||||||||| ||| | ||||| || || Sbjct 4567 ACATCCAAAAAGAATCAACTCTCCATTTAGTATT 4534 >seq7 Length=199231 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/214 (70%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| |||||| | ||||| ||| ||||| |||| || ||| || | Sbjct 43086 ATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAAGGCTCA 43145 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 || ||| |||| |||||| || || || ||||||||| | || | Sbjct 43146 GA-----TACCATCGAGAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAG 43200 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||||| ||||||||||| || |||||||| || |||| || | | || |||| Sbjct 43201 ACCAACAACGTTTAATTTTTGCAGGTAAACAATTAGAAGACGGTCGTACTCTCTCAGATT 43260 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 | || ||||||||||| ||| | ||||| || Sbjct 43261 ATAATATCCAAAAAGAATCTACTCTCCATTTAGT 43294 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 || |||||||||||||| |||||| | ||||| ||| || || | || |||||| | Sbjct 42855 AATATGCAAATTTTTGTCAAAACTTTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGT 42914 Query 27847 ACCGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 | || | || | ||| || ||| ||||| || ||||||||| | || | Sbjct 42915 TCAGATACCATTGAAAAT--GTTAAAACCAAAATCCAAGATAAAGAAGGTATCCCACCAG 42972 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||||| |||||||| || || |||||||| || || | || | | || || | Sbjct 42973 ACCAACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACT 43032 Query 27965 ACAACATCCAAAAAGA 27980 |||||||||||||||| Sbjct 43033 ACAACATCCAAAAAGA 43048 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| ||||| | ||||| ||| || || | || |||||| | | Sbjct 43770 ATGCAAATTTTTGTCAAAACATTAACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 43829 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | || || | |||| |||| | || ||||||||| |||| || | Sbjct 43830 GATACCATTGAAAA-CGTTAAAACTAAAA-TCCAAGATAAAGAAGGTATTCCACCAGACC 43887 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| |||||||| || || |||||||| || || | || | | || || |||| Sbjct 43888 AACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTACA 43947 Query 27968 ACATCCAAAAAGA 27980 ||||||||||||| Sbjct 43948 ACATCCAAAAAGA 43960 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || || |||||||| || ||| ||||||| | || || ||| || | Sbjct 43542 ATGCAAATTTTCGTAAAGACTCTTACCGGTAAAACTATTACATTAGAAGTTGAAGGCTCA 43601 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | || || | |||| || | | || ||||||||| | || || | Sbjct 43602 GATACCATCGAAAA-CGTTAAAACCAAGATTCAA-GATAAAGAAGGTATCCCACCAGATC 43659 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | || ||||| || |||||||| || || | || | | | || || |||| Sbjct 43660 AACAACGTCTTATCTTTGCAGGCAAACAATTAGAAGATGGTCGTACCCTCTCAGACTACA 43719 Query 27968 ACATCCAAAAAGA 27980 | ||||||||||| Sbjct 43720 ATATCCAAAAAGA 43732 >seq86 Length=87693 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 10/217 (5%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || ||||| |||||||| ||| || || | || |||||| || | Sbjct 63068 ATGCAAATTTTCGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63127 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 || ||| |||| |||||| || || || ||||||||| | || | Sbjct 63128 GA-----TACCATCGAAAACGTCAAAACCAAGATTCAAGATAAAGAAGGTATCCCACCAG 63182 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | || ||||| | ||||||||||| |||||||| || || | || | | || || | Sbjct 63183 ATCAACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACT 63242 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 ||||||| |||||||| ||| | ||||| ||||| Sbjct 63243 ACAACATTCAAAAAGAATCAACTCTCCATTTAGTTTT 63279 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| ||||| |||||||| || ||||| |||| || ||| || | Sbjct 62840 ATGCAAATTTTTGTTAAAACACTTACTGGTAAGACCATTACCCTTGAGGTAGAAGGCTCA 62899 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | || || | |||| |||| | |||||||||||| | || || | Sbjct 62900 GATACCATTGAAAA-CGTTAAAACTAAAA-TCCAAGACAAAGAAGGTATCCCACCAGACC 62957 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | |||||||| || |||||||| || || | || | | || || || | Sbjct 62958 AACAACGTCTCATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATA 63017 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 | || |||||||| ||| | ||||| ||| Sbjct 63018 ATATTCAAAAAGAATCAACTCTCCATTTAGTT 63049 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| ||||| |||||||| ||| || || | || |||||| | | Sbjct 63296 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGTTCA 63355 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || ||| ||||| |||||||||||| | || || | Sbjct 63356 GATACCATTGAAAAT--GTTAAAACCAAAATCCAAGACAAAGAAGGTATCCCACCAGACC 63413 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | ||||| || || |||||||| || || | || | | || ||||||| Sbjct 63414 AACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACA 63473 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 | || |||||||| ||| | ||||| ||| Sbjct 63474 ATATTCAAAAAGAATCAACTCTCCATTTAGTT 63505 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| ||||| |||||||| ||| || || | || |||||| || | Sbjct 63752 ATGCAAATTTTTGTCAAAACCCTTACTGGTAAAACCATCACCCTCGAAGTCGAAGGCTCA 63811 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | || |||||| || || ||||| |||||| | || || | Sbjct 63812 GATACCATTGAAAAC--GTCAAAACCAAGATTCAAGACAAGGAAGGTATCCCACCAGATC 63869 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | ||||||||||| |||||||| || || | || | | || || || | Sbjct 63870 AACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGACTATA 63929 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 |||| |||||||| ||| | ||||| ||| Sbjct 63930 ACATTCAAAAAGAATCAACTCTCCATTTAGTT 63961 >seq246 Length=49296 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| ||||| | ||||| ||| ||||| | || |||||| | | Sbjct 10811 ATGCAAATTTTTGTAAAAACCTTAACTGGTAAAACCATTACTTTAGAAGTCGAAGGTTCT 10752 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || ||| ||||| || ||||||||| | || || | Sbjct 10751 GATACCATCGAAAAT--GTAAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCAGATC 10694 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | ||||||||||| |||||||| || || | || | | ||||| |||| Sbjct 10693 AACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTACA 10634 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 | || |||||||| ||| | ||||| || || Sbjct 10633 ATATTCAAAAAGAATCAACTCTTCATTTAGTATT 10600 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| ||||| | ||||| || ||| || | || |||||| | | Sbjct 11039 ATGCAAATTTTTGTAAAAACCTTAACTGGTAAGACTATCACCTTAGAAGTCGAAGGTTCT 10980 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || ||| ||||| |||||||||||| | || || | Sbjct 10979 GATACCATCGAAAAT--GTAAAAGCTAAAATCCAAGACAAAGAAGGTATCCCACCAGATC 10922 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | ||||||||||| |||||||| || || | || | | ||||| || | Sbjct 10921 AACAACGTCTCATTTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCCGACTATA 10862 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 | || |||||||| ||| | ||||| ||||| Sbjct 10861 ATATTCAAAAAGAATCAACTCTTCATTTAGTTTT 10828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355858934678673