Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq86 102 7e-17 seq246 96.9 3e-15 seq242 96.9 3e-15 >seq86 Length=87693 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||| | || | || | ||||||||||||||||||||||||||| | Sbjct 63522 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTGTAATCAGAA 63463 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||| |||||||| || || | ||||| | |||||||||| || Sbjct 63462 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGG 63403 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | ||||||||||| ||||| ||| |||| | | || || || || || Sbjct 63402 ATACCTTCTTTGTCTTGGATTTTGGTTTTAACATTTTCAATGGTATC--TGAACCTTCGA 63345 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||||| ||| || ||||| || || | ||||| | |||||||||||| Sbjct 63344 CTTCGAGGGTGATGGTTTTACCAGTAAGGGTTTTGACAAAAATTTGCAT 63296 Score = 100 bits (110), Expect = 2e-16 Identities = 168/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||| | || | || | ||||||||||||||||||||| || || | Sbjct 63066 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATATTATAGTCAGAA 63007 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||| |||||||| || ||| | || || | |||||||||| || Sbjct 63006 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGG 62947 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT- 101190 | ||||||||||| ||||| ||| || | | | || |||| | | || | Sbjct 62946 ATACCTTCTTTGTCTTGGATTTTAGTTTTAACGTTTTCAATGGTATCTGAG--CCTTCTA 62889 Query 101191 -TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATTACAATAT 101249 || | |||||| || || || || | |||||||| |||||||||||| |||| || || Sbjct 62888 CCTCAAGGGTAATGGTCTTACCAGTAAGTGTTTTAACAAAAATTTGCATAATTAAAAAAT 62829 Query 101250 A 101250 | Sbjct 62828 A 62828 >seq246 Length=49296 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||||| || | || | |||||||||||||||||||||||| |||| Sbjct 10585 CCACCTCTTAATCTTAATACTAAATGAAGAGTTGATTCTTTTTGAATATTGTAGTCGGAA 10644 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||| |||||||| || ||| | || || | |||||| ||| || Sbjct 10645 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGG 10704 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | |||||||| || ||||| ||| |||| | | || || | || || Sbjct 10705 ATACCTTCTTTATCTTGGATTTTGGCTTTTACATTTTCGATGGTATC--AGAACCTTCGA 10762 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | ||||| ||||| || || || ||||| | |||||||||||| Sbjct 10763 CTTCTAAAGTAATGGTTTTACCAGTTAAGGTTTTTACAAAAATTTGCAT 10811 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || || || | |||||| || | || | ||||||||||||||||||||| || |||| Sbjct 10813 CCACCACGAAGTCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCGGAA 10872 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||| |||||||| || ||| | || || | |||||| ||| || Sbjct 10873 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCTGGTGGG 10932 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | ||||||||||| ||||| ||| |||| | | || || | || || Sbjct 10933 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCGATGGTATC--AGAACCTTCGA 10990 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | ||| ||||| || || || || ||||| | |||||||||||| Sbjct 10991 CTTCTAAGGTGATAGTCTTACCAGTTAAGGTTTTTACAAAAATTTGCAT 11039 >seq242 Length=49570 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||| | || | || | |||||||||||||||||| ||||| || | Sbjct 3607 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAA 3666 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||| |||||||| || ||| | ||||| |||||||| ||| || Sbjct 3667 AGAGTACGACCATCTTCTAATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGGG 3726 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | ||||||||||| |||||| ||| || | | | || |||| | | || Sbjct 3727 ATACCTTCTTTGTCTTGAATTTTAGTTTTAACGTTTTCAATAGTATCTGAG--CCTTCAA 3784 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | ||||| ||||| || || || ||||||| ||||||||||| Sbjct 3785 CTTCTAAAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 3833 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||| | || | || | |||||||||||||||||| |||||||| | Sbjct 4063 CCACCTCTTAATCTAAGGACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGAA 4122 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||| |||||||| || ||| | || || | |||||| ||| || Sbjct 4123 AGAGTACGACCATCTTCTAATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTGGG 4182 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | |||||||| || ||||| ||| |||| | | || |||| | | || Sbjct 4183 ATACCTTCTTTATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCTGAG--CCTTCAA 4240 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | ||| |||||||| || || | ||||||| |||||||||||| Sbjct 4241 CTTCTAAGGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATTTGCAT 4289 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||| | || | || | ||||||||||||||| ||||| || || | Sbjct 4291 CCACCTCTTAATCTAAGAACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAA 4350 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||| |||||||| || ||| | ||||| |||||||| ||| || Sbjct 4351 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGG 4410 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTG-T 101190 | |||||||| || ||||| ||| || | | | || |||| | | | | Sbjct 4411 ATACCTTCTTTATCTTGGATTTTGGTTTTGACGTTTTCAATTGTATCTG-AGCCTTCGAC 4469 Query 101191 TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||||| |||||| ||||| || || | ||||||| |||||||||||| Sbjct 4470 TTCGAGGGTAATGGTTTTACCAGTAAGGGTTTTAACAAAAATTTGCAT 4517 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || || || | |||||| || | || | ||||||||||||||| || ||||| || | Sbjct 4519 CCACCACGGAGTCTTAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAG 4578 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| |||||| |||||||| || ||| | ||||| |||||||| ||| || Sbjct 4579 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGA 4638 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT- 101190 | |||||||| || ||||| || |||| | | || || | | | || | Sbjct 4639 ATTCCTTCTTTATCTTGGATTTTGGTCTTTACATTTTCAATGGTATCAGAG--CCTTCTA 4696 Query 101191 -TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTAT 101241 ||| | ||||| || ||||| || | ||||||| |||||||||||| || Sbjct 4697 CTTCTAAAGTAATGGTCTTGCCAGTAAGAGTTTTAACAAAAATTTGCATAAT 4748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409656810799941