Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq213 141 8e-29 >seq213 Length=53756 Score = 141 bits (156), Expect = 8e-29 Identities = 215/299 (72%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| ||||||| ||||| | |||||| || | || | |||||| ||||| ||||| Sbjct 48358 ACATGCAAAATTGCAATGAAGACCTTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAA 48299 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGAC--CCAGAAAAG 4664 || ||||||||||||||||| || | ||| || ||| | |||| || ||| || Sbjct 48298 ACCTGGCATTAAACCTCTCTTCTTTAACCAGAAAATA-CTACAAA-AACTACCACTGAAA 48241 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 || || || ||||| |||||||| || || || || | || || | | | Sbjct 48240 AAGATACCCTCTACTGCGGCAAATGCAACCAAACGTTCTGCAAAAGA---ATCACTATTA 48184 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 |||||||||||||||||||| | |||||| || |||| || ||||| || | ||| ||| Sbjct 48183 TTAATCCATTTTAATGCCCAATCAGCTTTCTTTTTAATACATGGAATGGTATCTATTGCG 48124 Query 4785 TTAAATAATTTACTTTTTT-CAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842 ||||||| ||||||||||| | || |||| |||||| || || |||| || |||| Sbjct 48123 TTAAATAGTTTACTTTTTTGCTCAT-TATCTTTAATATATGTATCAATTAAAAGACTAT 48066 Score = 123 bits (136), Expect = 2e-23 Identities = 203/292 (70%), Gaps = 3/292 (1%) Strand=Plus/Minus Query 4846 TTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA 4905 ||||||| || |||||||| || ||||| || || || ||||| ||||||||||||| | Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 4906 CTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965 ||| || || | ||||| | | ||||||||||| ||||| ||| || | Sbjct 47932 TTTGGACCTCACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCGG 47873 Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTT---TTTTCC 5022 |||| || || ||||||| || ||||| | |||||| | || |||| | ||| Sbjct 47872 CAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGTTGAGTTTACTACTCC 47813 Query 5023 AGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTT 5082 | | | | |||| | | ||||| |||||| | |||||||| ||||| |||| Sbjct 47812 AATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGCTT 47753 Query 5083 TTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 ||| |||||| ||| ||||| || || | || |||| || |||||||| Sbjct 47752 GTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCT 47701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427045441471067