Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq230 389 5e-103 seq213 179 5e-40 >seq230 Length=51241 Score = 389 bits (430), Expect = 5e-103 Identities = 1106/1678 (66%), Gaps = 54/1678 (3%) Strand=Plus/Plus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||| |||||||||||||||||||| ||||| |||| |||||||||||| | Sbjct 28017 GTACGGAGATAGTACATACCAGTTTTGAGACCTTTTTTCCAAGAGTAGAAATGCATTGAT 28076 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || ||||| | | || | || || || ||| || ||| | ||||||||||| || Sbjct 28077 GTAAGTTTAGCAAAAGTTGGTTCAGCAATAAAAACATTGAAACTTTGACTTTGATCAATA 28136 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTA-TAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990 ||||| || | |||||| ||||| | | ||||| || |||| ||||||||||| || Sbjct 28137 AAAGCACCACGATCAGCAGCCATATCAATTAATGTTC-TTTGTCTAATTTCCCAAACTGT 28195 Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATC 77047 |||| ||| || ||| | ||||||||||| | || || ||||||| ||||||| | Sbjct 28196 TTTGTAAAGTTCTTTAAGATCATCTGGAATGGATGGGATACTTTGAATTGAACCACGGT- 28254 Query 77048 TGA-TATAATTGTATTCTTTATATCATCATTCCACAATTTCCT--CTCTGTTAAAACTCT 77104 ||| | ||| |||||||| || | | | ||| ||||| ||| | | | || Sbjct 28255 TGAGAACGATTTGATTCTTTA-ATTCTGGTGAC-CAAATTCCTAACTCCATGAGATCTTC 28312 Query 77105 AAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATT 77164 || || || ||| || || |||||| |||| || || | |||| ||||||| || Sbjct 28313 GAGAAGTTGTTTATTGACAATAGTAAATTCACCAGCTAAAACACGACGACTGTAAATGTT 28372 Query 77165 ACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGG 77224 ||||||||||||||| | |||| ||||| || |||||||| | ||| || |||||||| Sbjct 28373 ACTGGTATATGGTTCAAAGCATTCGTTGTTACCTAAAATTTGTGAAGTTGATGCAGTTGG 28432 Query 77225 CATAGGTGCCACCAATAAACTATTTCTGAGACCA--TGTGTT-CTGATTTTATCTTTTAG 77281 ||| ||||| | || | || | |||||| | | || ||||||||||| || Sbjct 28433 CATTGGTGCTATTAAAAGTGAGTTACGAAGACCACCTTTATTAACAATTTTATCTTTGAG 28492 Query 77282 ATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCC 77341 || |||| | |||| ||| || ||| ||||| ||| | ||||||||| ||||| || Sbjct 28493 ATCAGTCCAGTTCCAACGATTTGTTGGTGTAACATTCCAGAAATCGTATTGGAGAATACC 28552 Query 77342 GTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACA 77401 | || || ||| || ||| |||||||||| || ||||| | || || || Sbjct 28553 TTGGCTGGCTGGTGAACCTTTAAATGTTTCATATGGACCTTCAATAAGAGATAACTCGTG 28612 Query 77402 ACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG-TG 77460 ||| | || | ||||||| ||||| ||| | | || | || ||| | Sbjct 28613 TGATGCTGTAAGGGCAGCAAAATAAATAGTTTCTGCAATTTCAATGTTTA-ATTTTGCGG 28671 Query 77461 CTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTC 77520 | | ||| |||||| || | | | |||| || |||| || | || |||| | Sbjct 28672 CAGCGGTACCATCAAATGGCATACGAAGTTGAATGAAAACATCAGCAAGACCTTGAATAC 28731 Query 77521 CAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAAT 77580 |||||||||| || | |||||| ||| || |||| |||||| ||| ||||| || | Sbjct 28732 CAATACCAATTGGACGATGTCTTAAATTAGAGGTTTTGGCTTCTTGAACTGGATAGTAGT 28791 Query 77581 TAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAA 77640 || || |||||||| || ||||| | ||| | |||| | || | ||||| Sbjct 28792 TACGATCAATAATTTTGTTAAGATTCTTGGTAACAATTTTAGTGATTTCATAAAGTTTTT 28851 Query 77641 GAAAATCAAA-TCTT--------------------CCATCTAT--AACAAA--CATGTT- 77674 || |||||| |||| || ||| | || || || || Sbjct 28852 GATGATCAAATTCTTTTTCTTTTGGATTGGTTGAACCTTCTTTTCTACGAATGAATTTTG 28911 Query 77675 -CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTA 77733 || || || ||||| |||||||| || || | ||||| | | | ||||| || | Sbjct 28912 GTAAGGCAATGGATGCGAGATTACATACAGCAATCTCATCTGGGGATGTGTATTGAATAA 28971 Query 77734 TCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTAT 77793 | |||||||| |||||||| | | ||||| || ||||| | ||| ||| || || Sbjct 28972 TTTCGGTACAAAGATTACTGCTGCTAATAGTACCAAGATTCTTTTGATTGGATTTAGAAT 29031 Query 77794 TGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAG 77853 | || || || ||||| |||||||| || || || ||||||| || || || || || | Sbjct 29032 TACAAGAATCTTTATAGAGAATAAATGGTGTACCAGTTTCAACTTGAGACTCCATGATTG 29091 Query 77854 ATTTCCAGACGACTCTAGCTTTTATCATA-GATTTGTATCGCCT-CTCT-CTTTCATA-T 77909 ||| | || |||||| || | | | | | | |||| | | ||||||| | Sbjct 29092 CAAACCAAAGTTCTTGAGCTTTAATTACACGTCTAGCAAGGCCTGGTGTATTTTCATATT 29151 Query 77910 TGAGTATATAGCCGTTC---AAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCA 77966 |||| ||| | |||| | ||| ||| | || || | | ||| ||| Sbjct 29152 TGAG-ATAAA---GTTCACGATGTTCTTCTGAGTGAGTTTCGTCAAGACGTGGGGCTTCG 29207 Query 77967 TTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGT 78026 || || || | | |||||| || || | || | |||| || ||| || ||||| Sbjct 29208 TTAGGACAAAAGAGTGACCAATCTCCGTTTTGTTCTACTCTTTCCATGAAAAGATCGCTG 29267 Query 78027 ATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTA 78086 | ||| ||||| ||| ||||||| || ||| |||||| || || ||||||||| Sbjct 29268 ACCCAAAGAGCGTAAAAGAGATCTCTGGCTCTCATTTCTTCCTTACCATGATTCTTTTTG 29327 Query 78087 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCA 78146 || || | ||| || | |||||| || ||||||||||| ||||||| ||| | | || Sbjct 29328 AGTTCAATAAATTCAAAAATATCTGAGTGCCATGGTTCGAGATATACTGCAAAGGCACCT 29387 Query 78147 GGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATT 78206 || |||| ||| || ||||||| ||| | || || | ||| |||| | | |||| Sbjct 29388 TTTCTTTTACCACCACCTTGATCTACATAACGAGCAGTATCATTGAAAACACGGAGCATT 29447 Query 78207 GGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA 78266 || | | ||| ||| || ||||| || ||| |||||||||| | || ||||| Sbjct 29448 GGTACCAAACCATTACTGGTGCCATTGGTACCACGAATATAACTTTGAGCGGCACGAATC 29507 Query 78267 TTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAAT 78326 ||| | || ||||| || ||||| || || |||| ||| || |||| | Sbjct 29508 TTATGGCAAGCAATACCTATACCACCTGCAGATTTTGAAATTAAAGCACATTGTTTGAGG 29567 Query 78327 GTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATT 78386 ||||| || ||||| || || || || |||| | || | ||| || |||||| Sbjct 29568 GTATCATAAATACCATCGATTGAATCCTCTTTCATTTGAACTAAAAAGCATGAGGACATT 29627 Query 78387 TGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTT 78444 || | | || || ||||| || | || || | ||||| ||||| ||||| Sbjct 29628 TGTGGGTATGGTGTACCAGCATTGAAAAGAGTTGGTGTGGCATGTGTAAAGAGTTTTT 29685 >seq213 Length=53756 Score = 179 bits (198), Expect = 5e-40 Identities = 222/303 (73%), Gaps = 3/303 (1%) Strand=Plus/Minus Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 |||| |||||||||||||||||||| || || || || ||||||||||| ||||||| | Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 48496 TCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAG 48555 | || ||||| | |||| || | ||| || ||||| || |||||| ||| | Sbjct 47932 TTTGGACCTCACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCGG 47873 Query 48556 CAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT---CC 48612 |||| |||||||| |||| |||||||| |||||| | |||||| | || Sbjct 47872 CAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGTTGAGTTTACTACTCC 47813 Query 48613 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTT 48672 | || |||| |||| || | ||| | |||||| ||||||||||| ||| ||||||| Sbjct 47812 AATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGCTT 47753 Query 48673 TTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGAT 48732 |||||||||| |||| ||||| ||||| ||||| || | |||||||||| | || Sbjct 47752 GTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCTATCTTTAT 47693 Query 48733 TTT 48735 ||| Sbjct 47692 TTT 47690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694661861995360