Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq230 385 7e-102 seq213 149 9e-31 >seq230 Length=51241 Score = 385 bits (426), Expect = 7e-102 Identities = 1223/1866 (66%), Gaps = 65/1866 (3%) Strand=Plus/Plus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| ||||| ||||| | | | ||||| ||||| ||||||||||||||||||| Sbjct 27982 CAACAGTGAATTGAATAGCATCAGCAGCTGGACGAGTACGGAGATAGTACATACCAGTTT 28041 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | ||||| |||| |||||||||||| ||| ||||| | | || | || || | Sbjct 28042 TGAGACCTTTTTTCCAAGAGTAGAAATGCATTGATGTAAGTTTAGCAAAAGTTGGTTCAG 28101 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 | ||| || ||| | ||||||||||| || ||||| || | |||||| ||||| | Sbjct 28102 CAATAAAAACATTGAAACTTTGACTTTGATCAATAAAAGCACCACGATCAGCAGCCATAT 28161 Query 75552 TTAT-AATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCT 75610 || |||| ||||| | ||||||||||| |||||| ||| || ||| | ||||||| Sbjct 28162 CAATTAATGTTCTTT-GTCTAATTTCCCAAACTGTTTTGTAAAGTTCTTTAAGATCATCT 28220 Query 75611 GGAA--GATTTG-TATTTTGAATGGATCCGCCATC-AGATATAATTGTATTCTTGATCTC 75666 |||| ||| | || ||||||| || || | | ||| | ||| |||||| | || Sbjct 28221 GGAATGGATGGGATACTTTGAATTGAACCACGGTTGAGAACGATTTG-ATTCTTTAATTC 28279 Query 75667 ATCATTCCACAATTTTCT--CTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGA 75724 | | | ||| || || ||| | | | || || || || ||| ||||| | Sbjct 28280 -TGGTGAC-CAAATTCCTAACTCCATGAGATCTTCGAGAAGTTGTTTATTGACAATAGTA 28337 Query 75725 AATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 75784 ||||| |||| || || | ||| ||||||| ||||||||||||||||| | |||| Sbjct 28338 AATTCACCAGCTAAAACACGACGACTGTAAATGTTACTGGTATATGGTTCAAAGCATTCG 28397 Query 75785 TTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTT 75844 ||||| || |||||||| | |||||| ||||| ||||| ||||| | || | || Sbjct 28398 TTGTTACCTAAAATTTGTGAAGTTGATGCAGTTGGCATTGGTGCTATTAAAAGTGAGTTA 28457 Query 75845 CTGAGACCA--TGTGTT-CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAT 75901 | |||||| | | || ||||||||||| |||| |||| | |||| ||| || | Sbjct 28458 CGAAGACCACCTTTATTAACAATTTTATCTTTGAGATCAGTCCAGTTCCAACGATTTGTT 28517 Query 75902 GGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATAT 75961 ||| ||||| ||||| ||||||||| ||||| || | ||| || ||| || ||| || Sbjct 28518 GGTGTAACATTCCAGAAATCGTATTGGAGAATACCTTGGCTGGCTGGTGAACCTTTAAAT 28577 Query 75962 GTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAA-CGCACCGTAATA 76020 ||||| || | || || | || || ||| | || ||| ||| | |||| Sbjct 28578 GTTTCATATGGACCTTCAATAAGAGATAACTCGTGTGATG-CTGTAAGGGCAGCAAAATA 28636 Query 76021 AATTGTTTCGAAAATCTTCTTATTAAGATCTTGC-GCTTCAAGACTATCAAAAGGATAAT 76079 ||| ||||| ||| | | || | || |||| || | || |||||| || | Sbjct 28637 AATAGTTTCTGCAATTTCAATGTTTA-ATTTTGCGGCAGCGGTACCATCAAATGGCATAC 28695 Query 76080 GTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCT 76139 | | |||| || |||| || || || |||| ||||||||||| || | |||||| Sbjct 28696 GAAGTTGAATGAAAACATCAGCAAGACCTTGAATACCAATACCAATTGGACGATGTCTTA 28755 Query 76140 TATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGAT 76199 ||| || ||| |||||| ||| || || || ||| ||| |||||||| || |||| Sbjct 28756 AATTAGAGGTTTTGGCTTCTTGAACTGGATAGTAGTTACGATCAATAATTTTGTTAAGAT 28815 Query 76200 TTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTT---------- 76249 | || ||| | |||| | || | ||||| || |||||||| | Sbjct 28816 TCTTGGTAACAATTTTAGTGATTTCATAAAGTTTTTGATGATCAAATTCTTTTTCTTTTG 28875 Query 76250 -----------CCATCTAT--CACAAACATAT-----TAAGAGCTATAGATGCTAGATTA 76291 || ||| | || || || |||| || || ||||| |||||| Sbjct 28876 GATTGGTTGAACCTTCTTTTCTACGAATGAATTTTGGTAAG-GCAATGGATGCGAGATTA 28934 Query 76292 CAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACAC 76351 || || || | ||||| | | ||||| || || || || || |||||||| | Sbjct 28935 CATACAGCAATCTCATCTGGGGATGTGTATTGAATAATTTCGGTACAAAGATTACTGCTG 28994 Query 76352 TTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACA 76411 | ||||| |||||||| | ||| ||| || ||||| || || ||||| |||| | Sbjct 28995 CTAATAGTACCAAGATTCTTTTGATTGGATTTAGAATTACAAGAATCTTTATAGAGAATA 29054 Query 76412 AACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT 76471 || || || |||||||||| || || || || || | ||| | || |||||| Sbjct 29055 AATGGTGTACCAGTTTCAACTTGAGACTCCATGATTGCAAACCAAAGTTCTTGAGCTTTA 29114 Query 76472 ATTATA-GATTTGTATCG-CTTCTCT-CTTTCATATTGTGTATATAACCGTTC---AAAT 76525 |||| | | | | | | || | | ||||||||| || | |||| |||| | | Sbjct 29115 ATTACACGTCTAGCAAGGCCTGGTGTATTTTCATATT-TG-AGATAA-AGTTCACGATGT 29171 Query 76526 TCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCA 76585 || ||| | || || | || || ||| || ||||| | | |||||| || Sbjct 29172 TCTTCTGAGTGAGTTTCGTCAAGACGTGGGGCTTCGTTAGGACAAAAGAGTGACCAATCT 29231 Query 76586 CCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 76645 || | || | || | || ||| || ||||| | ||| ||||| ||| |||||| Sbjct 29232 CCGTTTTGTTCTACTCTTTCCATGAAAAGATCGCTGACCCAAAGAGCGTAAAAGAGATCT 29291 Query 76646 CGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCA 76705 | || ||| |||||| || || ||||||||| || || | || || | |||||| Sbjct 29292 CTGGCTCTCATTTCTTCCTTACCATGATTCTTTTTGAGTTCAATAAATTCAAAAATATCT 29351 Query 76706 GAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCT 76765 || ||||||||||| ||||||| || | |||| || |||| ||| || |||||| Sbjct 29352 GAGTGCCATGGTTCGAGATATACTGCAAAGGCACCTTTTCTTTTACCACCACCTTGATCT 29411 Query 76766 ATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCA 76825 | ||| | ||||| | ||| |||| | | |||||| | | || ||| || ||| Sbjct 29412 ACATAACGAGCAGTATCATTGAAAACACGGAGCATTGGTACCAAACCATTACTGGTGCCA 29471 Query 76826 TTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCT 76885 || || ||| |||||||||| | |||||||| ||| || | ||||| || Sbjct 29472 TTGGTACCACGAATATAACTTTGAGCGGCACGAATCTTATGGCAAGCAATACCTATACCA 29531 Query 76886 CCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTA 76945 ||||| ||| || |||| |||||| |||| | || ||||| || || || || | Sbjct 29532 CCTGCAGATTTTGAAATTAAAGCACATTGTTTGAGGGTATCATAAATACCATCGATTGAA 29591 Query 76946 TCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTA 77005 || || |||| | || | ||| || |||||||| | | || || ||||| Sbjct 29592 TCCTCTTTCATTTGAACTAAAAAGCATGAGGACATTTGTGGGTATGGTGTACCAGCATTG 29651 Query 77006 AACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATA 77065 || | || || | ||||| || || ||||| | | | | ||| || || | Sbjct 29652 AAAAGAGTTGGTGTGGCATGTGTAAAGAGTTTTTGACTTAATTTCTCGTAGGT---AAGA 29708 Query 77066 ACTGC---TTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122 | ||| || ||||| |||||| || | || |||||||| | ||| || || Sbjct 29709 ATTGCATTGTCGATATCGTTACCATGAATACCGATAGAAACACGCATTAGCATGTGTTGT 29768 Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAG-TATGATTTTTCCAAAGTTTTAAA 77181 || ||||| || | |||| || | | | ||| ||||| ||| || ||||| || Sbjct 29769 GGACGTTCAACGATGCTATTGTTGA-TACGATGAAGATATGAACGTTCTAATGTTTTGAA 29827 Query 77182 ACCAAA 77187 |||||| Sbjct 29828 ACCAAA 29833 >seq213 Length=53756 Score = 149 bits (164), Expect = 9e-31 Identities = 211/294 (72%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||||||||||| |||||||| |||||||| | | ||||||||||| ||||| || | Sbjct 48358 ACATGCAAAATTGCAATGAAGACCTTCATCACGAGAGATTAATTCGTTTGAAAAGGTTAA 48299 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT-CCAGAAAAGA 46747 || ||||||| || | ||| || | ||| || ||| | | ||| | ||| || | Sbjct 48298 ACCTGGCATTAAACCTCTCTTCTTTAACCAGAAAATA-CTACAAAAACTACCACTGAAAA 48240 Query 46748 ATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAA 46807 | || || ||||| || || ||||| || | | ||| | || || ||||| || Sbjct 48239 AGATACCCTCTACTGCGGCAAATGCAACCAAACGTTCTGCAAAAGAATCACTATTATTAA 48180 Query 46808 TCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 46867 |||| || ||||||||||| || || || | ||| || || || ||||| || |||| Sbjct 48179 TCCATTTTAATGCCCAATCAGCTTTCTTTTTAATACATGGAATGGTATCTATTGCGTTAA 48120 Query 46868 AGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTAT 46921 | || |||||| ||| ||||||||| ||||||||| ||||||||||||| Sbjct 48119 ATAGTTTACTTTTTTGCTCATTATCTTTAATATATGTATCAATTAAAAGACTAT 48066 Score = 140 bits (154), Expect = 5e-28 Identities = 218/307 (71%), Gaps = 11/307 (4%) Strand=Plus/Minus Query 46925 TTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 46984 |||| || ||||| |||||||| || || || || || ||||||||||| ||||| | || Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 46985 TCTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCA 47043 | || ||||| | |||| | | ||| ||| || || || || |||||| ||| Sbjct 47932 TTTGGACCTCACTCATGAATC-TAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCG 47874 Query 47044 GCAAAAAATGCCAATACATGTTTAATAAAAT---ATTTTTCATCGGTAGTCAGTT---TA 47097 ||||| ||||| || |||| |||||||| || | |||| | |||| || Sbjct 47873 GCAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCG---TTGAGTTTACTA 47817 Query 47098 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCT 47157 |||| || |||| |||| || | ||| | |||||| |||||||| || || ||| Sbjct 47816 CTCCAATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCT 47757 Query 47158 GCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTT 47217 |||| |||||||||| |||| ||||| | |||| || ||||| | |||||||||| | Sbjct 47756 GCTTGTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCTATCT 47697 Query 47218 GGATTTT 47224 ||||| Sbjct 47696 TTATTTT 47690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712927279567680