Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq7 116 9e-21 seq242 111 4e-19 seq20 98.7 2e-15 >seq7 Length=199231 Score = 116 bits (128), Expect = 9e-21 Identities = 165/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | ||| || ||||| ||||||||||| ||||| || | | || | || Sbjct 43757 TCTGAGAACTAAATGGAGGGTAGATTCTTTTTGGATATTGTAGTCTGAGAGGGTACGACC 43698 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || |||||||| | || || || | | ||| ||||| || Sbjct 43697 ATCTTCTAATTGTTTGCCTGCAAAGATAAGACGTTGTTGATCTGGTGGGATACCTTCTTT 43638 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||| || ||| || | || | | | ||||| | || ||||| | ||||| Sbjct 43637 ATCTTGAATCTTGGTTTTAACGTTTTCGATGGTATCTGAGCCTTCAACTTCTAATGTAAT 43578 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 |||||| || || |||||||| ||||| | ||||| ||| |||| ||| Sbjct 43577 AGTTTTACCGGTAAGAGTCTTTACGAAAATTTGCATGCCACCTCTTAATCT 43527 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || | ||| || ||||| ||||||||||||||||| || | | ||| | || Sbjct 43073 TCTGAGAACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGACC 43014 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || ||||| || | | || ||||| | | ||| ||||| || Sbjct 43013 ATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGTGGGATACCTTCTTT 42954 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| ||||| ||| ||| | || | | | ||||||| || ||||| || || || Sbjct 42953 ATCTTGGATTTTGGTTTTAACATTTTCAATGGTATCTGAACCTTCGACTTCGAGGGTGAT 42894 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || | ||| || || || | ||||| || Sbjct 42893 GGTTTTACCAGTTAAAGTTTTGACAAAAATTTGCATATT 42855 Score = 111 bits (122), Expect = 4e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | ||| |||||||| ||||||||||| || ||||| | | ||| | || Sbjct 43301 TCTAAGTACTAAATGGAGAGTAGATTCTTTTTGGATATTATAATCTGAGAGAGTACGACC 43242 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||||| ||| || || || || | | || ||||| | | ||| ||||| || Sbjct 43241 GTCTTCTAATTGTTTACCTGCAAAAATTAAACGTTGTTGGTCTGGTGGGATACCTTCTTT 43182 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 |||||||| || |||||| |||| | | | ||||| | || |||||||||||||| Sbjct 43181 ATCTTGAATCTTGGTTTTGACGTTCTCGATGGTATCTGAGCCTTCAACTTCAAGAGTAAT 43122 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || | ||| || || || | ||||| Sbjct 43121 GGTTTTACCAGTTAAAGTTTTGACAAAAATTTGCAT 43086 Score = 102 bits (112), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||||||||| | ||| || ||||| ||||||||||||||||| || | | ||| | || Sbjct 43985 TCTGAGGACTAAATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGACC 43926 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || ||||| || | | || ||||| | | || ||||| || Sbjct 43925 ATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCTGGTGGAATACCTTCTTT 43866 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| ||||| ||| || | || | | | ||||||| || ||||| || || || Sbjct 43865 ATCTTGGATTTTAGTTTTAACGTTTTCAATGGTATCTGAACCTTCGACTTCGAGGGTGAT 43806 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 ||||| || || | || || || || | ||||| ||| |||| ||| Sbjct 43805 GGTTTTACCAGTTAATGTTTTGACAAAAATTTGCATACCACCTCTTAATCT 43755 Score = 100 bits (110), Expect = 7e-16 Identities = 155/220 (70%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| |||||||| || ||||| || ||||| || | | || | |||||||||| Sbjct 43517 ATGGAGAGTAGATTCCTTTTGAATATTGTAGTCAGAGAGTGTACGGCCATCTTCTAATTG 43458 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || |||||||| || | | || || || | | ||| ||||| || |||||||| || Sbjct 43457 CTTACCGGCGAAAATTAAACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATCTT 43398 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| || | || | | | ||||||| || |||||||||||||||||||| || || Sbjct 43397 GGTTTTAACGTTTTCAATGGTATCTGAACCTTCGACTTCAAGAGTAATAGTTTTACCAGT 43338 Query 152081 GAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCTA 152119 | ||||| || || | ||||| ||| |||| |||| Sbjct 43337 TAATGTCTTGACAAAAATTTGCATACCACCTCTTAATCTA 43298 >seq242 Length=49570 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 |||||| | || | ||| ||||| || ||||||||||||||||| || | | ||| | Sbjct 4527 GAGTCTTAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACG 4586 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||||| ||| || || || ||||| || || || || | | |||||||| Sbjct 4587 ACCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGAATTCCTTC 4646 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || ||||| ||||| || ||| | || | | | || || | |||||||| | ||| Sbjct 4647 TTTATCTTGGATTTTGGTCTTTACATTTTCAATGGTATCAGAGCCTTCTACTTCTAAAGT 4706 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || ||||| || ||||| || || || | ||||| Sbjct 4707 AATGGTCTTGCCAGTAAGAGTTTTAACAAAAATTTGCAT 4745 Score = 105 bits (116), Expect = 2e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | ||| ||||| || |||||||| |||||||| || | | ||| | || Sbjct 3618 TCTAAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACC 3677 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || || ||||| || || || || | | ||| ||||| || Sbjct 3678 ATCTTCTAATTGTTTACCTGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTT 3737 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||||||||| ||| || | || | | ||||| | || ||||| | |||||| Sbjct 3738 GTCTTGAATTTTAGTTTTAACGTTTTCAATAGTATCTGAGCCTTCAACTTCTAAAGTAAT 3797 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || | ||| || ||||| | ||||| Sbjct 3798 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 3833 Score = 104 bits (114), Expect = 5e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | ||| ||||| || |||||||| ||||||||||| | | ||| | || Sbjct 4074 TCTAAGGACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACC 4133 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || || || || | || || || | | ||| ||||| || Sbjct 4134 ATCTTCTAATTGTTTTCCTGCAAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCTTT 4193 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| ||||| ||| ||| | || | | ||||| | || ||||| | || || Sbjct 4194 ATCTTGGATTTTAGTTTTAACATTTTCAATAGTATCTGAGCCTTCAACTTCTAAGGTGAT 4253 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCTA 152119 |||||| || || ||||| || || || | ||||| ||| |||| |||| Sbjct 4254 AGTTTTACCAGTAAGAGTTTTAACAAAAATTTGCATACCACCTCTTAATCTA 4305 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | ||| ||||| || ||||||||||| || || || | | ||| | || Sbjct 4302 TCTAAGAACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAAAGAGTACGACC 4361 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || || ||||| || || || || | | ||| ||||| || Sbjct 4362 ATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCTTCTTT 4421 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| ||||| |||||| | || | | ||||| | || ||||| || ||||| Sbjct 4422 ATCTTGGATTTTGGTTTTGACGTTTTCAATTGTATCTGAGCCTTCGACTTCGAGGGTAAT 4481 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || || || | ||||| Sbjct 4482 GGTTTTACCAGTAAGGGTTTTAACAAAAATTTGCAT 4517 Score = 89.7 bits (98), Expect = 1e-12 Identities = 161/234 (69%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | || | ||| ||||| || ||||||||||| || || || | | ||| | Sbjct 3844 AGTCTTAATACTAAATGGAGAGTTGATTCTTTTTGGATATTATAGTCAGAGAGAGTACGA 3903 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||||| ||| || || || || | | || || || | | ||| ||||| Sbjct 3904 CCATCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGGATACCTTCT 3963 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || |||||||| || || ||| | || | | ||||| | || ||||| | |||| Sbjct 3964 TTATCTTGAATCTTGGTCTTTACATTTTCAATTGTATCTGAGCCTTCAACTTCTAAAGTA 4023 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCTA 152119 |||||||| || || | ||| || ||||| | ||||| ||| |||| |||| Sbjct 4024 ATAGTTTTACCGGTTAAAGTTTTGACGAAAATTTGCATACCACCTCTTAATCTA 4077 >seq20 Length=149080 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | ||| | || || || || |||||||| || |||||||| ||| || Sbjct 74492 CTAAGTCTTAAGACTAAGTGGAGGGTTGATTCTTTTTGAATATTGTAATCTTGTAAGGTA 74551 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||||| ||| ||||||||||| | | || ||||| | | ||| ||| Sbjct 74552 CGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGGTCAGGTGGGATACCT 74611 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||| ||||| ||||| | || | | | ||||||| || ||||| ||| Sbjct 74612 TCTTTGTCTTGGATTTTAGCCTTGACGTTTTCGATGGTATCTGAACCTTCAACTTCGAGA 74671 Query 152064 GTAATAGTTTTGCC 152077 || || ||||| || Sbjct 74672 GTGATGGTTTTACC 74685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153808988120129