Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20purpureum_20[genbank_20GCA_5F000190715.1_202011-03- 02] 799 sequences; 32,967,225 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq213 183 3e-41 >seq213 Length=53756 Score = 183 bits (202), Expect = 3e-41 Identities = 219/295 (74%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 23807 TTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACA 23866 ||||||| |||||||||||||| ||||| || || |||||||||||||||||||| | | Sbjct 47992 TTTCAGAGTGAATATTTTCAATTGCAATTTGGAAACCATAAAAACATCTAGCTTCTGGAA 47933 Query 23867 ATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAG 23926 ||| || ||| | | ||||| | || | ||||||||| |||||||||||| ||| | Sbjct 47932 TTTGGACCTCACTCATGAATCTAGTGGCAAGATTTTCGTTTACAATACCATCAGAAGCGG 47873 Query 23927 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA--GTTGA-TAATTTTTTCC 23983 ||||||| || | ||||| |||||||| | ||| | | ||||| | | ||| Sbjct 47872 CAAAGAATGCTAAAACATTGGAAATAAAATGACGTTCGTTATCGTTGAGTTTACTACTCC 47813 Query 23984 AATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCAC 24043 |||| || | |||| || | ||||| ||| || |||||||||||||||| || Sbjct 47812 AATCGTTGAGATCTGGTGCAAGATCAATTTCTTCTGCTGTCCAAAAACTTGCTTCTGCTT 47753 Query 24044 GCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCTATC 24098 | |||||||| ||| ||||| | || ||||||||||| ||| |||||||| Sbjct 47752 GTTTATACATACTCCAGATATCTGGGTATTTTATTGGAAATAATACAAATCTATC 47698 Score = 174 bits (192), Expect = 2e-38 Identities = 405/604 (67%), Gaps = 19/604 (3%) Strand=Plus/Minus Query 23208 AACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAA 23267 |||||| |||| |||||| | || | ||||||||| ||||| || | | | Sbjct 48658 AACACCAGTTTTAGCATATTCGGCTACTTTACCTTCGAAAAAGTTTGTTTTTCTTTGGAG 48599 Query 23268 TGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAA 23327 || || ||||||| ||||||| ||||| |||| |||||| | |||| | || Sbjct 48598 GGAAATCATTTCCATCCAATCAAAAGGATTTGAAGCATTATAAATCTTTTTATAACCCAA 48539 Query 23328 TTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTAT 23387 | ||||| | ||| || ||||||||| |||||| |||| || | || || Sbjct 48538 TGAGACCAAAAGACGATCAGCACAAAATTCAATGTATTGAGACATTGAACGACTATTCAT 48479 Query 23388 ACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA---GC 23444 ||| |||| | |||||| | | ||| | | ||| |||||| | ||||| || Sbjct 48478 ACCAATTAAATCTACTGGTAAAGAGTCACAAATAAATTCTTTTTC---GCAAACAACGGC 48422 Query 23445 ATCTTTAATTAT---TTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAA 23501 |||| |||| || || || | | ||| | || | | | | |||| | | | Sbjct 48421 ATCTCTAATAATGGCTTCAAGAGT--CTTGGATTCGAGTTTGTT-TATTAATTTGGTGTA 48365 Query 23502 CAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAA 23561 || | ||||||||||| ||||| || |||||||| | | || ||||| || ||||| Sbjct 48364 TAAAAGACATGCAAAATTGCAATGAAGACCTTCATCACGAGAGATTAATTCGTTTGAAAA 48305 Query 23562 TGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCA--AAATATTGCAGCAAATGATCCG 23619 ||||| ||||||||||| |||| || || | ||| ||||| | || || | | Sbjct 48304 GGTTAAACCTGGCATTAAACCTCTCTTCTTTAACCAGAAAATACTACAAAAACTACCACT 48245 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 ||||| | |||||||| || || ||||| || || | |||| |||| | || || Sbjct 48244 GAAAA--AGATACCCTCTACTGCGGCAAATGCAACCAAACGTTCTGCAAAAGAATCACTA 48187 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 | || | ||||||||| || ||||| ||| ||| ||| | ||| ||| || || Sbjct 48186 TTATTA---ATCCATTTTAATGCCCAATCAGCTTTCTTTTTAATACATGGAATGGTATCT 48130 Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAA 23799 ||||| || || || | |||||| ||||||||| | |||||||||||||||| | | Sbjct 48129 ATTGCGTTAAATAGTTTACTTTTTTGCTCATTATCTTTAATATATGTATCAATTAAAAGA 48070 Query 23800 CTAT 23803 |||| Sbjct 48069 CTAT 48066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521482791638600