Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31]
1 sequences; 19,924,566 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 2e-13
>seq1
Length=19924566
Score = 91.5 bits (100), Expect = 2e-13
Identities = 148/212 (70%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 73394 AGAAAGATTAACTGGAAAAGAAGGTCAAATAAGAAACAATTTATTAGGTAAAAGGTGTGA 73453
||||||| | | | ||| ||||| | ||||| ||| || | || ||||| |||
Sbjct 10946368 AGAAAGACTTTCAAGTAAACAAGGTAGATTAAGATTAAATCTAATGGGAAAAAGAGTTGA 10946427
Query 73454 AATGTCTGCTAGAACTGTTATAGGACCAGATCCAACACTAAAAATTGATGAAGTAATTGT 73513
| ||||| ||||| ||||| ||||||||||| || ||| |||||||| ||
Sbjct 10946428 TTTTTCTGCCAGAACAGTTATTTCACCAGATCCAAATTTATCAATGGATGAAGTTGGAGT 10946487
Query 73514 TCCAAAAGAAATTGCTCAATCTTTAACTTTTCCTGACTTTGTTAACAAACACAATATAGA 73573
|||| || | ||||| || |||||| ||||| || | |||| |||| |||| |||
Sbjct 10946488 ACCAACAGGAGTTGCTAAAATTTTAACATTTCCAGAAGTAGTTACTCAACATAATAAAGA 10946547
Query 73574 TAGATTGACTAAATTAGTTAATTCTGGTAATG 73605
| ||| |||||||||| | |||| ||||
Sbjct 10946548 AAAATTACAGAAATTAGTTAGTGCTGG-AATG 10946578
Score = 84.2 bits (92), Expect = 3e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 74046 CCATATAATGCAGATTTTGATGGAGATGAAATGAATGCTCATGCGCCTCAATCAGAAGAA 74105
|||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||
Sbjct 11551574 CCATATAATGCAGATTTTGATGGAGATGAAATGAATTTACATGTGCCACAAACAGAAGAA 11551515
Query 74106 AGTAAAGCTGA 74116
| ||||||
Sbjct 11551514 GCAAGAGCTGA 11551504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679814391502320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |