Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 3e-12 >seq1 Length=19924566 Score = 87.8 bits (96), Expect = 3e-12 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 97689 GTGATAGGTATCGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTGTGAGCGTATG 97748 || || ||||| |||||||| |||||||| |||||| | | || || | ||| | ||| Sbjct 4694614 GTTATTGGTATTGATGAAGGTCAGTTCTTCCCAGACTTAATAGAGTTTTCAGAG-GCATG 4694556 Query 97749 -GCAAACGAAGGAAAAATAGTTATAGTAGCCGCACTTGATGGGACATTTCAACGTAAACC 97807 |||| | |||| | | || || |||| ||| | ||||| ||||| ||| | ||||| Sbjct 4694555 TGCAAGTTATGGAAGATTGGTAATCATAGCAGCATTAGATGGTACATTCCAAAGAAAACC 4694496 Query 97808 GTTTA-ATAATATCTTGAATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCTG 97866 ||| | || | ||| |||||||||||||| ||||| || ||| ||| ||||| Sbjct 4694495 ATTTGGACAAATTACTGA-TCTTATTCCATTATGTGAAAGCGTAAAAAAGTTAAGTGCTG 4694437 Query 97867 TGTGTATGAAATGCTTTAAGGAAGCTTCCTTTTC 97900 | ||| | || || ||| |||| | ||||| Sbjct 4694436 TTTGTGTTAATTGTGGTAAAAAAGCAGCTTTTTC 4694403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268791021640