Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 4e-12 >seq1 Length=19924566 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || |||||||| | || || ||||| | ||| || |||||||| || || ||||| || Sbjct 18441611 CCTCCTCTTAATCTTAAGACTAAATGAAGTGTTGATTCTTTTTGAATGTTATAATCTGAA 18441552 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | | | | || || ||||| ||||| ||| || | | ||| || || | || Sbjct 18441551 AGAGTCTTTCCTTCTTCTAATTGTTTTCCTGCAAAAATAAGTCTTTGTTGATCTGGTGGA 18441492 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 || ||||||||||| |||| ||| | | | ||| | ||| || |||| || Sbjct 18441491 ATTCCTTCTTTTTCTTGAATCTTAGCTTTAATAGCATCAATAGAGTCATTTGGTTCGACT 18441432 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | || || || ||||| ||||||||||| || || |||||||| Sbjct 18441431 TCTAATGTGATAGTCTTTCCAGTAAGAGTTTTAACAAAGATTTGCAT 18441385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777596114898