Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 163 7e-35 >seq1 Length=19924566 Score = 163 bits (180), Expect = 7e-35 Identities = 237/335 (71%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 12612 ATTTTCAATTGTTGAATGTTCTTGAATTAATTGATATGCTCGAGTTGGGCCAATTCCTTT 12671 |||||| |||| | || || ||||||||||| | |||| | | || |||| |||||| Sbjct 11894421 ATTTTCTATTGATTTATATTGTTGAATTAATTCAAATGCAGTAATAGGACCAACTCCTTT 11894362 Query 12672 AATTGTTTTAGTATAGTCACATCCAGAAAGAATGCAAATCTCAATAAATTGATCCATTGT 12731 ||| |||| | ||| ||||||||| | ||| |||| || |||||||| ||||| || Sbjct 11894361 AATAGTTTCACAATAATCACATCCAAGTAAAATACAAAGGTCTATAAATTGTTCCATAGT 11894302 Query 12732 AATTCCCATGTCATTTAAAATATTTGGCAACGAGTATTCAACTGTTGGTTGCTTCTTTTG 12791 || ||| | || | ||||||| || ||||| ||||| | |||| | ||||| | Sbjct 11894301 AAATCCTGTCTCTTCTAAAATAGATGATAACGAATATTCCCTTATTGGATCTTTCTTATT 11894242 Query 12792 ATCGGTGCTATTAATATGACGGATTACATATGTTGATCCAAATGTCAGAGAATCCATGTC 12851 ||| | | ||| | | | ||||| ||||| ||||| || | |||||| || Sbjct 11894241 ATCATTTGCACTAAACTTCCTTACTACATGCTCGGATCCTAATGTAAGTGCATCCATATC 11894182 Query 12852 TTCAGTTGCTGTGGCATACGCTTTTCCTGTTTTTACATATGCAGCACATGTAGCTTCGGC 12911 ||| || ||||| ||||| |||||||| ||| || |||||||||| ||| |||| || Sbjct 11894181 TTCTGTAGCTGTTGCATAACATTTTCCTGCTTTAACTAATGCAGCACAAGTACCTTCTGC 11894122 Query 12912 CTCACATGGTGCTTGAACGACCGGAATGCCCATTA 12946 ||||| |||| || ||||| ||||||| Sbjct 11894121 TTCACAATTAGCTTCAATACATGGAATTCCCATTA 11894087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353583300782