Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 8e-12 >seq1 Length=19924566 Score = 86.0 bits (94), Expect = 8e-12 Identities = 155/220 (70%), Gaps = 10/220 (5%) Strand=Plus/Plus Query 126978 AAACATATGGTTAAAGATAAAATGCATGCTAGAAGTCATGGTCAAGTAACAACA-TTACA 127036 |||||||||||| ||||||||||||||| | || ||| | | | ||| ||||| Sbjct 9175713 AAACATATGGTTCTTGATAAAATGCATGCTCGTGCTCGTGGACCAAAATCAAGTCTTACA 9175772 Query 127037 TCGTCAACCAAACTGTGGTCGTTCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAA 127096 | ||||||| ||| | || || ||||||||| | || |||||||||||| Sbjct 9175773 A-GACAACCAACAGAAGGTAGATCAAGAGATGGTGGATTGCGTTTAGGAGAAATGGAACG 9175831 Query 127097 AGATTGTAT-TTTGGTTCATGGAGCCACACAATTTTTAAATGAAAG---AATGTTTTTAT 127152 ||||||| | |||||| ||||||| || | || ||| ||||| ||||| || | Sbjct 9175832 AGATTGTCTAATTGGTT-ATGGAGCAACTAATTTGTTATTAGAAAGATTAATGTATTCA- 9175889 Query 127153 GTTCAGATCCTTTTCAAATTGATGTGTGTACAAATTGTGG 127192 |||||| | ||| || || ||| |||| ||| ||||| Sbjct 9175890 --TCAGATGCATTTAAAGTTTGTGTTTGTAAAAAGTGTGG 9175927 Score = 84.2 bits (92), Expect = 3e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 126594 ATACCAGAAATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 126652 || ||| |||||||||| ||||| | ||| || |||| | |||||||||| |||||| Sbjct 1821367 ATTCCACAAATTGGAGATAAATTCTCTTCAAGACATGGAC-AAAAAGGAACAGTTGGTAT 1821425 Query 126653 GATTTATGCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTATAAT 126712 || |||| ||||||||||||||| |||||| ||| || | || || || || || Sbjct 1821426 GACTTATAGACAAGAAGATATGCCATTTACAATTGAAGGAATTTCACCAGACATCATTAT 1821485 Query 126713 TAATCCAAATTGTATACCGTCAAGAATGAC 126742 || ||| || ||| || || | ||||| Sbjct 1821486 GAACCCACATGCTATTCCATCTCGTATGAC 1821515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658403191769960