Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31]
1 sequences; 19,924,566 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 2e-32
>seq1
Length=19924566
Score = 154 bits (170), Expect = 2e-32
Identities = 376/553 (68%), Gaps = 24/553 (4%)
Strand=Plus/Minus
Query 77983 AAATAAATTTTAAATGAAAGATGGACGGGTATATAAAGTTAATTTTGGGTCCTATGTTTT 78042
|||| |||| ||| | | ||| | |||| ||| | |||||| | ||||||||||||
Sbjct 4694867 AAATGAATTAGAAAAAACATATG-ATGGGTCTATTCAATTAATTATTGGTCCTATGTTTA 4694809
Query 78043 CTGGAAAAACAACAGAATTAGTTAGaatagttaaaagatataaa-atagcaaattataaa 78101
||| ||||| || |||||| | ||| | ||||||| | || | || |||| | ||
Sbjct 4694808 GTGGTAAAACTACTGAATTAATAAGACTTATTAAAAGGTTTAGATATTCCAAA--AAAAC 4694751
Query 78102 tgctgt-gtaataaaatattataatgataataGATGTG-AT--GAAAGTATAGTAAAGAC 78157
| |||| || || ||||| | ||| |||| ||| | || || ||| | || | |
Sbjct 4694750 TACTGTTGTTATTAAATACTCTAAGGATACTAGGTATGGATCGGAAGATGAAGCTATTTC 4694691
Query 78158 GCACGATGGAGTTTACATTGATT-CTATTTCAACATTAAAACTTAACGATATAATTTATG 78216
|| ||| || | ||| || ||||| |||| | ||| |||| | | | || |
Sbjct 4694690 TCATGATAAAGAAT-CATGGAAAGCTATTCCAACCATGAAA-TTAATGCCAGTACTT--G 4694635
Query 78217 AAATGGAT---AATGTTGATGTTATTGGAATTGATGAAGGTCAATTTTTTAATGATATAG 78273
||| | | ||| ||| |||||||| |||||||||||||| || || || ||
Sbjct 4694634 AAACCGCTCTTAATTATGAAGTTATTGGTATTGATGAAGGTCAGTTCTTCCCAGACTTAA 4694575
Query 78274 TGGAATTTTCTGAAAATATG-GCAAATAAAGGAAAAATTGTTATTGTTTCGGCATTAGAT 78332
| || ||||| || ||| |||| | | |||| | | || || | | |||||||||
Sbjct 4694574 TAGAGTTTTCAGAGGC-ATGTGCAAGTTATGGAAGATTGGTAATCATAGCAGCATTAGAT 4694516
Query 78333 GCTACATATCAAAGAAAAACATTTGGTAATATTCTAAATTTAATTCCATTATCTGAAAAG 78392
| ||||| ||||||||| ||||||| | ||| || | |||||||||| |||||
Sbjct 4694515 GGTACATTCCAAAGAAAACCATTTGGACAAATTACTGATCTTATTCCATTATGTGAAAGC 4694456
Query 78393 GTAATAAAATTAAATGCTATATGTAAAATATGTTTTAATGATGCTGCATTTACAAAAAGA 78452
|||| ||| |||| |||| | ||| | ||| ||| | || || ||| || ||||
Sbjct 4694455 GTAAAAAAGTTAAGTGCTGTTTGTGTTAATTGTGGTAAAAAAGCAGCTTTTTCATTAAGA 4694396
Query 78453 TTATGT---GACGATACTAAAATTGAACTAATTGGTGGAGAGGATAAATATAGTTCTGTT 78509
|| || || | ||||||| | ||||| |||| ||||||||| || ||||
Sbjct 4694395 ACCAGTTCAGAAGAATC---AATTGAAGTTATTGGAGGAGTAGATAAATATTGTGCTGTC 4694339
Query 78510 TGTAGAAAATGTT 78522
|||||||||||||
Sbjct 4694338 TGTAGAAAATGTT 4694326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592316792596040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |