Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq1 102 1e-16 >seq1 Length=19924566 Score = 102 bits (112), Expect = 1e-16 Identities = 110/143 (77%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 194246 AAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTATGATTTAT 194304 |||| || |||||||| | ||| || |||| ||||||||||| |||||||| |||| Sbjct 1821374 AAATTGGAGATAAATTCTCTTCAAGACATGGA-CAAAAAGGAACAGTTGGTATGACTTAT 1821432 Query 194305 TCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAATCCA 194364 ||||||||||||||||||||||| | ||| || |||||| || ||||| || ||| Sbjct 1821433 AGACAAGAAGATATGCCATTTACAATTGAAGGAATTTCACCAGACATCATTATGAACCCA 1821492 Query 194365 AATTGTATTCCGTCCAGAATGAC 194387 || |||||| || | ||||| Sbjct 1821493 CATGCTATTCCATCTCGTATGAC 1821515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632489592093880