Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 6e-14 >seq1 Length=19924566 Score = 93.3 bits (102), Expect = 6e-14 Identities = 118/158 (75%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 201564 ATACGTATACCAGAAATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTG 201622 ||| | || ||| |||||||||||||||| | ||| || |||| ||||||||||| Sbjct 1821361 ATAAGAATTCCACAAATTGGAGATAAATTCTCTTCAAGACATGG-ACAAAAAGGAACAGT 1821419 Query 201623 TGGTATGATTTATGCACAAGAAGATATGCCGTTTACACAATCG--GGTATGACCCCGGAT 201680 |||||||| |||| ||||||||||||||| ||| ||||| | || || | || || Sbjct 1821420 TGGTATGACTTATAGACAAGAAGATATGCCATTT--ACAATTGAAGGAATTTCACCAGAC 1821477 Query 201681 ATTATAATCAATCCAAATTGTATACCATCAAGAATGAC 201718 || || || || ||| || ||| ||||| | ||||| Sbjct 1821478 ATCATTATGAACCCACATGCTATTCCATCTCGTATGAC 1821515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655279991809000