Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 4e-14 >seq1 Length=19924566 Score = 95.1 bits (104), Expect = 4e-14 Identities = 134/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 46521 GATATTATGGACGTAATTGACCAAGCTaaaaaaaTGGAAATAGGCATGGGTaaaaaaaCA 46580 ||| ||| | | || ||| | | |||||| | | |||| | | ||||| | ||| || Sbjct 808936 GATTTTAAGAAAGTGATTAATGACGCTAAACACA--GAAA-ACGTATGGGAATAAATACC 808880 Query 46581 ATTTTGTTTTTAGACGAAATACATCGTTTCAATAAAGGACAGCAAGATTCGTTATTACCT 46640 ||||| ||| | || ||||| ||| |||| |||| | |||||||| | || |||||| Sbjct 808879 ATTTTATTTCTTGATGAAATCCATAGTTTAAATAGATTGCAGCAAGACACATTTTTACCT 808820 Query 46641 TATGTTGAAGATGGAACAATTACGTTAATTGGTGCAACAACTGAAAATCCATTTTTTGAA 46700 | | ||| |||||| |||| | || |||||||| ||||||||||||| |||| | Sbjct 808819 GCTATAGAAAGTGGAACTATTATTCTTATAGGTGCAACTACTGAAAATCCATCGTTTG-A 808761 Query 46701 ATTAA 46705 ||||| Sbjct 808760 ATTAA 808756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591910379603648