Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31]
1 sequences; 19,924,566 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq1 150 8e-32
>seq1
Length=19924566
Score = 150 bits (166), Expect = 8e-32
Identities = 417/631 (66%), Gaps = 14/631 (2%)
Strand=Plus/Plus
Query 64862 GGATTATAACACATAATGTCAGTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATT 64921
||||||||| || | ||||||| ||||||| |||||||| | | ||||| | |
Sbjct 14351651 GGATTATAATTTGAAACGGCAGTACTCCATCCTGTTCCAATACCATCAGCTCCATTAACT 14351710
Query 64922 AAAATCATCGGAATAATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCC 64981
|| | | |||||||| || |||| | | || |||| | | | ||||||
Sbjct 14351711 AATACTGTAGGAATAATAGGGAAATAATATTTTGGTTCAATTCTTCTATCTTCATCAATA 14351770
Query 64982 AAATACTTCAAAATGGCATCATCCTCTTTTGGAAATATAGAACGAGTTAT--TTTATTCA 65039
| ||| | || || ||||| ||||| ||| ||| | | | | | || || || |
Sbjct 14351771 AGATATTCTAATATTTGGTCATCATCTTTAGGACATAAATATCTACTAATACTTGAT--A 14351828
Query 65040 ATTGAGTATAAATATATCTTTCGGATGCGTGGTCTT---GTCCAGTTCGTCGTGTTCCAA 65096
|| | ||||||||||||||| | | ||| || |||| ||| | || || ||||
Sbjct 14351829 ATCGTGTATAAATATATCTTGCTGCTGCTTGATCTTTGCCTCCTCCTAATCTTGAACCAA 14351888
Query 65097 ACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTC 65156
| |||||| ||| | ||| |||||| ||| ||||| ||| ||| || || |||||
Sbjct 14351889 ATTGACCAGATGGTAATAACCAATTAACATTATTTGATCCACAAAAGTTTTGTGCCATAT 14351948
Query 65157 CGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACAT 65216
| ||| | || | | | |||| || ||||||||| ||| | |||||| |||
Sbjct 14351949 TAACAATGGTAGCTTGAAGAGATACTTCTCCATGATGATATGATGACTTTTCAGAAACAA 14352008
Query 65217 ATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTT-TAA--ATGCAGAAT 65273
|||| ||||| | ||||||| ||| | | | ||| |||| ||| ||| |
Sbjct 14352009 GTCCAGATAATTGTGATACTTTTAATTCTTTCATAATATTTTTTTCTAAACATGTCCATA 14352068
Query 65274 ACAATATTTTCCGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCAC 65333
||| | || | || | | |||| |||||||| | | | |||||| || ||||
Sbjct 14352069 ACACTTTTCTTTGTGA--TGGTTTT-AATCCATCTACAACAGAAGGAATAGACCTTTCAC 14352125
Query 65334 AATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTCTTCATATGAAACACTCG 65393
|||||| | |||||| ||| |||||||| | || ||| |||||||| || |||
Sbjct 14352126 AATCATCATATGAGAATAATATTAATTCTTTATGAACAAAATCTTCATAACTAATACTAT 14352185
Query 65394 TATTATCTGTATTCAAATAACTATCGCGATTATATTTTTCTAACCATTCTTTTCTATCAC 65453
| |||| || | ||| ||| ||| |||| || |||||| ||||| | ||||
Sbjct 14352186 CAACATCTTGATCAAGATATGTATTTGGATCATATCCTTTTAACCACTCTTTACGATCAT 14352245
Query 65454 TTGAGCGTTTT-TATTAAATATTAAATCAAT 65483
|| | |||| |||||||| |||||| ||
Sbjct 14352246 CTGCTCTTTTTCTATTAAATGCTAAATCTAT 14352276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235679997127650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |