Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entamoeba_20histolytica_20[genbank_20GCA_5F001662325.1_202016-05-31] 1 sequences; 19,924,566 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 5e-15 >seq1 Length=19924566 Score = 96.9 bits (106), Expect = 5e-15 Identities = 292/440 (66%), Gaps = 16/440 (4%) Strand=Plus/Minus Query 95565 TATTCAGTTGATAATTGGTCCTATGTTTTCTGGTAAAAGTACAGAACTGATCAGAAGAGT 95624 |||||| || || ||||||||||||||| |||||||| ||| ||| | || ||| | Sbjct 4694837 TATTCAATTAATTATTGGTCCTATGTTTAGTGGTAAAACTACTGAATTAATAAGACTTAT 4694778 Query 95625 TAGACGTTATCAGATAGCACAATATAAATGCA-TAACCATAAAATATTCTAATGATAATA 95683 || | | | | ||||| ||| | || | | | || ||||| ||||| |||| || Sbjct 4694777 TAAAAGGTTT-AGATATTCCAAAAAAACTACTGTTGTTATTAAATACTCTAAGGATACTA 4694719 Query 95684 GATACGGAACAGGATTATGGA-------CGCACGATAGA-AATAATTTCTCTGCAACGGA 95735 | || ||| | ||| ||| | | || |||| | ||| || || | Sbjct 4694718 GGTATGGATC-GGAAGATGAAGCTATTTCTCATGATAAAGAATCATGGAAA-GCTATTCC 4694661 Query 95736 AACCACTAATTTACTAACTATCGTCGACACAGTTGCTAATTTCTCAGTGATAGGTATAGA 95795 ||||| || ||| | | | | || || | | ||||| ||| || ||||| || Sbjct 4694660 AACCATGAAATTAATGCCAGTACTTGAAACCGCTCTTAATTATGAAGTTATTGGTATTGA 4694601 Query 95796 TGAGGGACAATTCTTTCCTGACATAGTAGAATTTTGTGAACTCATG-GCAAACAATGGAA 95854 ||| || || ||||| || ||| || |||| |||| || |||| |||| |||||| Sbjct 4694600 TGAAGGTCAGTTCTTCCCAGACTTAATAGAGTTTTCAGAGG-CATGTGCAAGTTATGGAA 4694542 Query 95855 AAATAGTTATAGTGGCAGCATTAGATGGAACATTTCAACGCAAGCCGTTTACGAC-TATT 95913 | | || || | |||||||||||||| ||||| ||| | || || ||| ||| ||| Sbjct 4694541 GATTGGTAATCATAGCAGCATTAGATGGTACATTCCAAAGAAAACCATTT-GGACAAATT 4694483 Query 95914 TCGAATCTTATTCCGTTATCTGAAATGGTAGTAAAACTGACAGCAGTATGTATGAAGTGT 95973 | |||||||||| |||| ||||| ||| ||| | | || || ||| | || ||| Sbjct 4694482 ACTGATCTTATTCCATTATGTGAAAGCGTAAAAAAGTTAAGTGCTGTTTGTGTTAATTGT 4694423 Query 95974 TTTAAAGAGGCATCGTTTTC 95993 |||| | ||| | ||||| Sbjct 4694422 GGTAAAAAAGCAGCTTTTTC 4694403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668791316640