Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1860 109 5e-19 seq2450 107 2e-18 seq2282 107 2e-18 seq1856 100 3e-16 seq147 98.7 9e-16 seq5736 93.3 4e-14 seq6235 89.7 5e-13 seq1516 82.4 7e-11 >seq1860 Length=4765 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 ||||||||||| ||||| || ||| |||| || || || || ||| | || || || | Sbjct 2644 AACATGCAAATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCC 2585 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| | || || | || || |||| ||| |||||||||||| | || || ||| Sbjct 2584 TCCGATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGAC 2525 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || || || | || ||||||||||| ||| | || || | ||| | |||||| Sbjct 2524 CAACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTAC 2465 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| ||||| ||||| || |||| || Sbjct 2464 AACATCCAAAAGGAATCTACTCTCCACTTGGTCCT 2430 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||| |||| || || || || ||| | || || || | ||| Sbjct 1729 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 1670 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | || || | || || |||| ||| |||||||||||| | || || ||||| Sbjct 1669 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 1610 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||||||||| ||| | || || | ||| | |||||| ||| Sbjct 1609 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 1550 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || ||||| ||||| ||||| || |||| Sbjct 1549 ATCCAAAAGGAATCTACTCTCCACTTGGT 1521 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||| |||| || || || || ||| | || || || | ||| Sbjct 1957 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 1898 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | || || | || || |||| ||| |||||||||||| | || || ||||| Sbjct 1897 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 1838 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||||||||| ||| | || || | ||| | |||||| ||| Sbjct 1837 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 1778 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| ||||| ||||| || |||| || Sbjct 1777 ATCCAAAAGGAATCTACTCTCCACTTGGTCCT 1746 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||| |||| || || || || ||| | || || || | ||| Sbjct 2413 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 2354 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | || || | || || |||| ||| |||||||||||| | || || ||||| Sbjct 2353 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 2294 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||||||||| ||| | || || | ||| | |||||| ||| Sbjct 2293 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 2234 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| ||||| ||||| || |||| || Sbjct 2233 ATCCAAAAGGAATCTACTCTCCACTTGGTCCT 2202 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||| |||| || || || || ||| | || || || | ||| Sbjct 2185 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 2126 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || || | || || || | || ||||||||||| | || || ||||| Sbjct 2125 GACACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGGATCCCTCCTGACCAA 2066 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||| || || || ||||||||| ||| | |||||| ||| Sbjct 2065 CAACGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGCCGGACCCTTTCCGATTACAAC 2006 Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395 || || || ||||| ||||| || Sbjct 2005 ATCCAGAAGGAATCTACTCTCCA 1983 >seq2450 Length=27238 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| ||||||||||| ||| |||| || || || || ||| | || || || Sbjct 7207 CAACCATGCAGATTTTCGTAAAAACTTTGACGGGAAAGACAATTACCCTGGAGGTCGAGT 7266 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | || |||| || || | ||||| || | ||| ||||||||||| | || || | Sbjct 7267 CTTCTGACACCATCCAAGCCGTCAAGCAAAAAATTCAAGACAAGGAAGGTATTCCCCCTG 7326 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||| || || | || ||||||||||| ||| | || ||| | ||| | ||||| Sbjct 7327 ACCAACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATT 7386 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || ||||| ||||| || |||| || Sbjct 7387 ACAACATCCAGAAGGAATCTACTCTCCACTTGGTCCT 7423 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| ||||||||||||||| ||||| || || || || || ||||| |||| || || Sbjct 8663 CAACCATGCAAATTTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGT 8722 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| || || | || ||||||| || ||||||||||| | || || | Sbjct 8723 CTTCCGACACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATCCCCCCTG 8782 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||| || || | || ||||| ||||| ||| | || ||| | ||| | ||||| Sbjct 8783 ACCAACAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATT 8842 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 | ||||| || || || || ||||| || |||| Sbjct 8843 ACAACATCCAGAAGGAGTCTACTCTCCACTTGGT 8876 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||||||||| ||| |||| || || || || ||| | || || || | ||| Sbjct 7440 ATGCAAATTTTCGTAAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 7499 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || || | || ||||||| ||| ||||||||||| | || || ||||| Sbjct 7500 GACACCATCCAAGCCGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 7559 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||| || || ||| | || || | || | |||||| ||| Sbjct 7560 CAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTTTCCGATTACAAC 7619 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| ||||| ||||| || |||| || Sbjct 7620 ATCCAAAAGGAATCTACTCTCCACTTGGTCCT 7651 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||| |||| || || || || ||| | || || || | || Sbjct 7668 ATGCAAATTTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCTTCT 7727 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || || | ||||| || | || ||||||||||| | || || ||||| Sbjct 7728 GACACCATCCAAGCCGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAA 7787 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||| ||||| ||| | || ||| | ||| | |||||| ||| Sbjct 7788 CAACGATTGATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCCGATTACAAC 7847 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| ||||||||||| || |||| || Sbjct 7848 ATCCAAAAGGAATCGACTCTCCACTTGGTCCT 7879 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || ||||| |||| ||||| | ||| Sbjct 9124 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAGACTATCACTCTCGAAGTTGAGTCCTCC 9183 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | || || | || ||||||| || ||||||||||| | || || ||||| Sbjct 9184 GATACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATCCCCCCTGACCAA 9243 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||||||||| ||| | || ||| | ||| | |||||| ||| Sbjct 9244 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9303 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || || ||||| || |||| Sbjct 9304 ATCCAGAAGGAGTCTACTCTCCACTTGGT 9332 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || || || || ||||| |||| || || | ||| Sbjct 9352 ATGCAGATCTTCGTCAAAACGCTCACCGGTAAGACTATCACTCTCGAAGTCGAGTCCTCC 9411 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | || || | || || |||| ||| ||||||||||| | || || ||||| Sbjct 9412 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 9471 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||||||||| ||| | || ||| | ||| | |||||| ||| Sbjct 9472 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9531 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || ||||| |||||||| |||| Sbjct 9532 ATCCAGAAGGAATCTACTCTTCACTTGGT 9560 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||| |||| || || || || ||| | || || || | ||| Sbjct 8896 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCCTCC 8955 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || || | ||||| || | ||| ||||||||||| | || || ||||| Sbjct 8956 GACACCATCCAAGCCGTCAAGCAAAAAATTCAAGACAAGGAAGGTATTCCCCCTGACCAA 9015 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||||||||| ||| | || ||| | ||| | |||||| ||| Sbjct 9016 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9075 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || || ||||| || |||| Sbjct 9076 ATCCAGAAGGAGTCTACTCTCCACTTGGT 9104 >seq2282 Length=5406 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || || ||||| ||| |||| || || || || ||| | || || || Sbjct 398 CAACCATGCAGATCTTTGTAAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGT 339 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| || || | || ||||||| ||| ||||||||||| | || || | Sbjct 338 CCTCCGACACCATCCAAGCCGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTG 279 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||| || || | || ||||||||||| ||| | || || | ||| | ||||| Sbjct 278 ACCAACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATT 219 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 | ||||| ||||| ||||| ||||| || |||| Sbjct 218 ACAACATCCAAAAGGAATCTACTCTCCACTTGGT 185 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || |||||||| ||| |||| || || |||||||| |||| || || | ||| Sbjct 165 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACGATCACTCTCGAAGTCGAGTCTTCC 106 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || || | || ||||||| ||| ||||||||||| | || || ||||| Sbjct 105 GACACCATCCAAGCTGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 46 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 || || | || ||||| ||||| ||| | || ||| Sbjct 45 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGAC 10 >seq1856 Length=6291 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| || || || || || || || ||||| |||| || || | || Sbjct 5971 CATGCAAATCTTCGTCAAAACCCTCACCGGTAAGACTATCACTCTCGAAGTCGAGTCTTC 6030 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | || || | || || |||| ||| ||||||||||| | || |||||||| Sbjct 6031 CGATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGTATTCCCCCCGACCA 6090 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || || || || ||||| || || || ||||||||| || | |||||| || Sbjct 6091 ACAACGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGATTACAA 6150 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || || ||||| ||||| || |||| Sbjct 6151 CATCCAGAAGGAATCTACTCTCCACTTGGT 6180 >seq147 Length=786 Score = 98.7 bits (108), Expect = 9e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| ||||||||||||||| ||||| || || || || || ||||| |||| || || Sbjct 189 CAACCATGCAAATTTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGT 130 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| || || | || ||||||| || ||||||||||| | || || | Sbjct 129 CTTCCGACACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATTCCCCCTG 70 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||| || || | || ||||||||||| ||| | || ||| | ||| | ||||| Sbjct 69 ACCAACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATT 10 Query 31368 ATAACAT 31374 | ||||| Sbjct 9 ACAACAT 3 >seq5736 Length=2708 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| ||||||||| ||||| || || || ||||| || || ||||| |||| || || Sbjct 2229 CAACCATGCAAATCTTCGTCAAAACCCTCACAGGAAAGACTATCACTCTCGAAGTCGAGT 2288 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| || || | || || |||| ||| ||||||||||| | || || | Sbjct 2289 CCTCCGACACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAAGGTATTCCCCCTG 2348 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||| || || | || ||||| || || ||| | || || | ||| | ||||| Sbjct 2349 ACCAACAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATT 2408 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 | ||||| || || || || ||||| || |||| Sbjct 2409 ACAACATCCAGAAGGAGTCTACTCTCCACTTGGT 2442 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || ||||| |||| ||||| | ||| Sbjct 2462 ATGCAGATCTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTTGAGTCCTCC 2521 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | || || | || || |||| ||| ||||||||||| | || || ||||| Sbjct 2522 GATACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 2581 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||| || || ||| | || || | ||| | |||||| ||| Sbjct 2582 CAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 2641 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || || ||||| || |||| Sbjct 2642 ATCCAGAAGGAGTCTACTCTCCACTTGGT 2670 >seq6235 Length=3334 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || |||||||| ||| |||| || || ||||| ||| | || || || | ||| Sbjct 1204 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACGATTACCCTTGAGGTCGAGTCCTCC 1263 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || || | || || || | || ||||||||||| | || || ||||| Sbjct 1264 GACACCATCCAAGCCGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 1323 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||| || || ||| | || ||| | ||| | |||||| ||| Sbjct 1324 CAACGATTGATCTTCGCGGGAAAGCAGCTTGAGGACGGTCGCACTCTTTCCGATTACAAC 1383 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| ||||| || |||| || Sbjct 1384 ATCCAGAAGGAATCTACTCTCCACTTGGTCCT 1415 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || || || || ||||| |||| || ||| | ||| Sbjct 976 ATGCAGATCTTTGTCAAGACCCTCACCGGTAAGACTATCACTCTCGAAGTCGAATCCTCC 1035 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || || | || || || | || ||||||||||| | || || ||||| Sbjct 1036 GACACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGTATCCCCCCTGACCAA 1095 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || ||||| ||||| ||| | || || || | |||||| ||| Sbjct 1096 CAACGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACCCTTTCCGATTACAAC 1155 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || ||||| ||||| ||||| || |||| Sbjct 1156 ATCCAAAAGGAATCTACTCTCCACTTGGT 1184 >seq1516 Length=4393 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 31180 AATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGA 31239 |||| | ||| ||||||||| |||||||| ||| |||| || || || |||||| | || Sbjct 2275 AATTTCAACAACCATGCAAATCTTCGTAAAAACTTTGACGGGAAAGACAATCACCCTTGA 2334 Query 31240 CGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGT 31299 || || | ||||||| || || | || ||||||| ||| ||||||||||| | Sbjct 2335 GGTCGAGTCCTCCGACACCATCCAAGCCGTGAAACAGAAAATCCAAGACAAGGAAGGTAT 2394 Query 31300 GCCGCCCGACCAGCAGCG 31317 || || ||||| || || Sbjct 2395 CCCCCCTGACCAACAACG 2412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445714418065680