Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2450 102 8e-17 seq1860 102 8e-17 seq1292 102 8e-17 seq2282 100 3e-16 seq7632 96.9 4e-15 seq6235 96.9 4e-15 seq1856 91.5 1e-13 seq5736 82.4 8e-11 >seq2450 Length=27238 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| || || || | ||||| || || || |||||||||||| | |||| | Sbjct 9110 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCG 9051 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || ||||| |||||| ||||| || || || || || ||||| ||| Sbjct 9050 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTG 8991 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||||||||| || | || | ||||| | || || || |||| || | Sbjct 8990 TCTTGAATTTTTTGCTTGACGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATT 8931 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||||| || ||||| ||||| ||||| || |||||| Sbjct 8930 GTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCATA 8895 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 || ||||| || | ||||| || || |||| |||||||| || || |||||||||||| Sbjct 9581 TGTCCTCCACGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCG 9522 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 | |||| ||| ||||| || || ||||| |||||| ||||| || || || Sbjct 9521 GAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGG 9462 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || || ||||| ||||| ||||| || || | || | || || | || || Sbjct 9461 GGGATACCTTCCTTGTCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCG 9402 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||||| | ||| | ||||| ||||| | ||||| ||||| || |||||| Sbjct 9401 ACTTCGAGAGTGATAGTCTTACCGGTGAGCGTTTTGACGAAGATCTGCATA 9351 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||| ||||| |||||||||||| | |||| || ||||| || || || Sbjct 7636 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCCTCGAGCTGCTTTCCG 7577 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||||| || || || || || ||||| ||||| ||||| ||||| Sbjct 7576 GCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGGATTTTCTGTTTC 7517 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | || | ||||| | || || || |||| || | ||||| || ||||| ||| Sbjct 7516 ACGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATAGTCTTTCCCGTCAAAGTT 7457 Query 143168 TTTACGAATATTTGCATA 143185 |||||||| ||||||||| Sbjct 7456 TTTACGAAAATTTGCATA 7439 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 || ||||| || | ||| | || || || | || ||||| ||||| |||||||||||| Sbjct 7897 TGACCTCCACGAAGACGGAGGACCAAGTGGAGAGTCGATTCCTTTTGGATGTTGTAATCG 7838 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 | |||| ||| || || || || || || |||||| ||||| || || ||| Sbjct 7837 GAAAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGA 7778 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || || ||||| ||||| ||| ||||| || | || | ||||| | | || Sbjct 7777 GGGATACCTTCCTTGTCTTGAATCTTTTGCTTGACGGCTTGGATGGTGTCAGAAGACTCG 7718 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || |||| || | ||||| || ||||| ||||| ||||| ||||||||| Sbjct 7717 ACCTCAAGGGTAATAGTCTTTCCCGTCAAAGTTTTCACGAAAATTTGCATA 7667 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||| || || |||||||||||| | |||| ||| ||||| || || ||| Sbjct 7408 GTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCA 7349 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||||| || || || || || ||||| ||||| ||||||||| || Sbjct 7348 GCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTGTCTTGAATTTTTTGCTTG 7289 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | || | ||||| | | || || || | || | ||||| || ||||| ||| Sbjct 7288 ACGGCTTGGATGGTGTCAGAAGACTCGACCTCCAGGGTAATTGTCTTTCCCGTCAAAGTT 7229 Query 143168 TTTACGAATATTTGCAT 143184 |||||||| || ||||| Sbjct 7228 TTTACGAAAATCTGCAT 7212 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| || || || | ||||| || || || |||||||||||| | |||| | Sbjct 9338 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCG 9279 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || ||||| |||||| ||||| || || || || || ||||| ||| Sbjct 9278 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 9219 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||| || ||||| | || | || || | || || ||||| | ||| | Sbjct 9218 TCTTGAATCTTCTGTTTCACGGCTTGGATGGTATCGGAGGACTCAACTTCGAGAGTGATA 9159 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||||| ||||| | || || ||||| || |||||| Sbjct 9158 GTCTTACCGGTGAGGGTCTTGACGAAGATCTGCATA 9123 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| || || || | ||||| || || || |||||||||||| | |||| | Sbjct 8882 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCG 8823 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || || || |||||| ||||| || || || || || ||||| ||| Sbjct 8822 TCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 8763 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||| || ||||| | || | ||||| | | || ||||| | ||| | Sbjct 8762 TCTTGAATCTTCTGTTTCACGGCTTGGATGGTGTCGGAAGACTCGACTTCGAGAGTGATA 8703 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| ||||| | || || ||||| |||||||| Sbjct 8702 GTCTTCCCGGTGAGGGTCTTGACGAAAATTTGCAT 8668 >seq1860 Length=4765 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| ||||| || | |||||||| || || |||||||||||| | || | | Sbjct 1971 CGCAAGACTAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTCCGGCCG 2030 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | ||| || || || |||||| ||||| || || ||||| || ||||| ||| Sbjct 2031 TCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATCCCTTCCTTG 2090 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||| ||||| || | || | ||||| | || || || |||| || | Sbjct 2091 TCTTGAATCTTTTGCTTCACAGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATA 2150 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||||| || ||||| ||||| ||||| || |||||| Sbjct 2151 GTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCATA 2186 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| || || || | |||||||| ||||| |||||||||||| | |||| Sbjct 1515 CGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA 1574 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || ||||| |||||| ||||| || || || || |||||||| ||| Sbjct 1575 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTG 1634 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||||| || || | || | || || | || || || |||| || | Sbjct 1635 TCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAGGACTCGACCTCAAGGGTAATA 1694 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||||| || ||||| ||||| ||||| || |||||| Sbjct 1695 GTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCATA 1730 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||| ||||| |||||||||||| | |||| || ||||| || || ||| Sbjct 2445 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCA 2504 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||||| || || || || |||||||| ||||| ||||| || || Sbjct 2505 GCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTTC 2564 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | || | || || | || || || |||| || | ||||| || ||||| ||| Sbjct 2565 ACAGCTTGGATGGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTT 2624 Query 143168 TTTACGAATATTTGCAT 143184 || ||||| |||||||| Sbjct 2625 TTCACGAAGATTTGCAT 2641 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||| ||||| |||||||||||| | |||| || ||||| || || ||| Sbjct 1761 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCA 1820 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||||| || || || || |||||||| ||||| ||||| || || Sbjct 1821 GCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTTC 1880 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | || | || || | || || || |||| || | ||||| || ||||| ||| Sbjct 1881 ACAGCTTGGATGGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTT 1940 Query 143168 TTTACGAATATTTGCATA 143185 || ||||| || |||||| Sbjct 1941 TTCACGAAGATCTGCATA 1958 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||| ||||| |||||||||||| | |||| || ||||| || || ||| Sbjct 2217 GTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCA 2276 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||||| || || || || |||||||| ||||| ||||| || || Sbjct 2277 GCGAAGATCAATCGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATTTTCTGCTTC 2336 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | || | || || | || || || |||| || | ||||| || ||||| ||| Sbjct 2337 ACAGCTTGGATGGTATCGGAGGACTCGACCTCAAGGGTAATGGTCTTTCCCGTCAAAGTT 2396 Query 143168 TTTACGAATATTTGCATA 143185 || ||||| || |||||| Sbjct 2397 TTCACGAAGATCTGCATA 2414 >seq1292 Length=4421 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 || ||||| || | ||||| || || |||| |||||||| || || |||||||||||| Sbjct 286 TGTCCTCCACGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCG 227 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 | |||| |||||| | ||| || || || |||||| ||||| || || || Sbjct 226 GAAAGAGTGCGACCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGG 167 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || ||||| || ||||| ||||| || || | || | ||||| | | || Sbjct 166 GGGATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATGGTGTCAGAAGACTCG 107 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || |||| || | ||||| || ||||| ||||||||||| || |||||| Sbjct 106 ACCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTTACGAAGATCTGCATA 56 >seq2282 Length=5406 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| || || || | |||||||| ||||| |||||||||||| | |||| Sbjct 179 CGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTGCGACCA 238 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || ||||| |||||| ||||| || || || || || ||||| ||| Sbjct 239 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTG 298 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||||| ||||| | || | ||||| | || || || |||| || | Sbjct 299 TCTTGGATTTTCTGTTTCACGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATT 358 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| || ||||| |||||||| || || ||||| Sbjct 359 GTCTTTCCCGTCAAAGTTTTTACAAAGATCTGCAT 393 >seq7632 Length=1044 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 || ||||| || | ||||| || || |||| |||||||| || || |||||||||||| Sbjct 669 TGTCCTCCACGAAGGCGCAAGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCG 728 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 | |||| |||||| | ||| || || || |||||| ||||| || || || Sbjct 729 GAAAGAGTGCGACCGTCTTCCAATTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGG 788 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || ||||| || ||||| ||||| || || | || | ||||| | | || Sbjct 789 GGGATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGGCTTGGATAGTGTCAGAAGACTCG 848 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || |||| || | ||||| || ||||| ||||| ||||| || |||||| Sbjct 849 ACCTCAAGGGTAATTGTCTTTCCCGTCAAAGTTTTCACGAAGATCTGCATA 899 >seq6235 Length=3334 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| || || || | |||||||| ||||| |||||||||||| | |||| | Sbjct 1190 CGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGCCCA 1131 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || || || |||| || ||||| || || || || || ||||| ||| Sbjct 1130 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGTTGTTGGTCAGGGGGGATACCTTCCTTG 1071 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||| ||||| || | || | ||||| | || ||| ||||| | ||| | Sbjct 1070 TCTTGAATCTTTTGCTTCACAGCTTGGATGGTGTCGGAGGATTCGACTTCGAGAGTGATA 1011 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||||| ||||| | || || || || || |||||| Sbjct 1010 GTCTTACCGGTGAGGGTCTTGACAAAGATCTGCATA 975 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||| || || |||||||||||| | |||| ||| || || || || || Sbjct 1400 GTAGATTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCGTCCTCAAGCTGCTTTCCC 1341 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||||| || || || || || ||||| ||||| || ||||| || Sbjct 1340 GCGAAGATCAATCGTTGTTGGTCAGGGGGGATACCTTCCTTGTCTTGGATCTTTTGCTTC 1281 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | || | ||||| | || || || |||| || | |||||| || ||||| ||| Sbjct 1280 ACGGCTTGGATGGTGTCGGAGGACTCGACCTCAAGGGTAATCGTCTTTCCCGTCAAAGTT 1221 Query 143168 TTTACGAATATTTGCATA 143185 |||||||| || |||||| Sbjct 1220 TTTACGAAGATCTGCATA 1203 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| || || || | |||||||| || || ||||||||||| | |||| | Sbjct 962 CGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGGGTGCGACCG 903 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || || || |||||| ||||| || || ||||| || ||||| ||| Sbjct 902 TCCTCGAGCTGCTTCCCGGCGAAGATCAATCGTTGTTGGTCAGGAGGGATACCTTCCTTG 843 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || || ||||| || | || | ||||| | | || || || | ||| | Sbjct 842 TCTTGGATCTTTTGCTTCACAGCTTGGATGGTGTCGGAAGACTCGACCTCGAGAGTGATG 783 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||||| |||| ||||| || || || ||||| Sbjct 782 GTCTTGCCAGTCAGGGTTTTGACAAAGATCTGCAT 748 >seq1856 Length=6291 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| || || || | |||||||| || || |||||||||||| | |||| | Sbjct 6186 CGCAAGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCG 6127 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| | ||| || || || |||| || ||||| || ||||| || || ||||| ||| Sbjct 6126 TCTTCCAATTGCTTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGGGGAATACCTTCCTTG 6067 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||||| || || | || | || || | | || ||||| | ||| | Sbjct 6066 TCTTGGATTTTCTGCTTCACAGCTTGGATGGTATCGGAAGACTCGACTTCGAGAGTGATA 6007 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| ||||| | ||||| ||||| |||||||| Sbjct 6006 GTCTTACCGGTGAGGGTTTTGACGAAGATTTGCAT 5972 >seq5736 Length=2708 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 ||||| || || || | ||||| || || || |||||||||||| | |||| Sbjct 2448 CGCAAGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGACCA 2389 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 || ||||| || || || || |||||| ||||| || || || || || ||||| ||| Sbjct 2388 TCCTCGAGCTGCTTTCCGGCGAAGATCAATCGTTGTTGGTCAGGGGGAATACCTTCCTTG 2329 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || ||||| || || | || | ||||| | || || ||||| | ||| | Sbjct 2328 TCTTGGATTTTCTGCTTCACGGCTTGGATGGTGTCGGAGGACTCGACTTCGAGAGTGATA 2269 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| || || | ||||| ||||| |||||||| Sbjct 2268 GTCTTTCCTGTGAGGGTTTTGACGAAGATTTGCAT 2234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506955275783280