Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq6446 104 4e-17 >seq6446 Length=1463 Score = 104 bits (114), Expect = 4e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 194076 AGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGAT 194135 || |||||||| || || ||||| ||||| || ||||||||||| ||| ||||||||||| Sbjct 796 AGAGATTGGGGGCATGCTAAGGAGTATGTCGAGGCGATGTGGTTGATGCTGCAACAGGAT 737 Query 194136 GAACCCGATGATTATGTGATTGCTACAGGTGAACAGTATTCTGTTAGAGACTTTGTG 194192 | |||||||| | |||||||| ||||| |||| || || ||||||||| || Sbjct 736 AAGCCCGATGACTTTGTGATTGGGACAGGGATTGAGTACTCCGTGAGAGACTTTATG 680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807461028969240