Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq6235 163 2e-35 seq1856 154 1e-32 seq2450 140 3e-28 seq2282 136 3e-27 seq1860 131 1e-25 seq5736 127 2e-24 seq147 116 3e-21 seq247 111 1e-19 seq1292 107 2e-18 seq7632 104 2e-17 seq1953 98.7 8e-16 seq1516 86.0 5e-12 >seq6235 Length=3334 Score = 163 bits (180), Expect = 2e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | |||||||| || ||||||| ||||| ||| || || Sbjct 976 ATGCAGATCTTTGTCAAGACCCTCACCGGTAAGACTATCACTCTCGAAGTCGAATCCTCC 1035 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | | || ||||| |||||||||||||| ||||| || || || ||| Sbjct 1036 GACACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGTATCCCCCCTGACCAA 1095 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || |||||||| ||| | |||||| |||||| | |||||||||||| Sbjct 1096 CAACGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACCCTTTCCGATTACAAC 1155 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || ||||| | || || ||| Sbjct 1156 ATCCAAAAGGAATCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGT 1203 Score = 127 bits (140), Expect = 2e-24 Identities = 135/178 (76%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||||| || || || ||| | ||||| ||||| || || || Sbjct 1432 ATGCAAATTTTCGTGAAAACTTTGACGGGAAAGACGATTACTCTCGAAGTCGAGTCCTCC 1491 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | | | | | || ||||| |||||||||||||| || || || || || ||| Sbjct 1492 GATACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGAATCCCTCCTGACCAA 1551 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 ||||| | || || || ||||| ||| | |||||| ||||| | |||||||||| Sbjct 1552 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACA 1609 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| ||||| | || || || || ||||||| || || || | || Sbjct 748 ATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACCATCACTCTCGAGGTCGAGTCTTCC 807 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | | || ||||| || ||||||||||| ||||| || || || ||| Sbjct 808 GACACCATCCAAGCTGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAA 867 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || ||||| || ||| | ||||| |||||| | || ||||||||| Sbjct 868 CAACGATTGATCTTCGCCGGGAAGCAGCTCGAGGACGGTCGCACCCTTTCTGATTACAAC 927 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||||| || | || || || ||||| | || || ||| Sbjct 928 ATCCAGAAGGAATCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGT 975 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||||| || || || ||| | || ||||| || || || || Sbjct 1204 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACGATTACCCTTGAGGTCGAGTCCTCC 1263 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | || ||||| || ||||||||||| ||||| || || || ||| Sbjct 1264 GACACCATCCAAGCCGTGAAGCAAAAGATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 1323 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || || || ||| | ||||| ||||| | |||||||||||| Sbjct 1324 CAACGATTGATCTTCGCGGGAAAGCAGCTTGAGGACGGTCGCACTCTTTCCGATTACAAC 1383 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 1384 ATCCAGAAGGAATCTAC 1400 >seq1856 Length=6291 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || ||||| | |||||||| || ||||||| ||||| || | || Sbjct 5972 ATGCAAATCTTCGTCAAAACCCTCACCGGTAAGACTATCACTCTCGAAGTCGAGTCTTCC 6031 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | | | | | || || ||||| ||||||||||| |||||||| ||||| ||| Sbjct 6032 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGTATTCCCCCCGACCAA 6091 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || ||||| || || || || || ||||||| | |||||||||||| Sbjct 6092 CAACGCCTCATCTTCGCCGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGATTACAAC 6151 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||||| || | || || || ||||| | || || ||| Sbjct 6152 ATCCAGAAGGAATCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGT 6199 >seq2450 Length=27238 Score = 140 bits (154), Expect = 3e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||||| || || || || | || ||||| || || || || Sbjct 7440 ATGCAAATTTTCGTAAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 7499 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | ||||| ||||| ||||||||||| ||||| || || || ||| Sbjct 7500 GACACCATCCAAGCCGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 7559 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || ||||| || ||| | |||||| |||||| | |||||||||||| Sbjct 7560 CAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTTTCCGATTACAAC 7619 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| ||||| || Sbjct 7620 ATCCAAAAGGAATCTAC 7636 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | |||||||| || ||||||| ||||| || || || Sbjct 9352 ATGCAGATCTTCGTCAAAACGCTCACCGGTAAGACTATCACTCTCGAAGTCGAGTCCTCC 9411 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | | | | | || || ||||| ||||||||||| ||||| || || || ||| Sbjct 9412 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 9471 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | ||||| ||||| | |||||||||||| Sbjct 9472 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9531 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||| || | || || || ||||| | || ||||| Sbjct 9532 ATCCAGAAGGAATCTACTCTTCACTTGGTCTTGCGCCTTCGTGGAGG 9578 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||||| || || || || | || ||||| || || | | Sbjct 7668 ATGCAAATTTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCTTCT 7727 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | |||| ||||| |||||||||||||| ||||| || || || ||| Sbjct 7728 GACACCATCCAAGCCGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAA 7787 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || |||||||| ||| | ||||| ||||| | |||||||||||| Sbjct 7788 CAACGATTGATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCCGATTACAAC 7847 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || | || | || |||||| Sbjct 7848 ATCCAAAAGGAATCGACTCTCCACTTGGTCCTCCGTCTTCGTGGAGGT 7895 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||||| || || || || | || ||||| || || || || Sbjct 8896 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCCTCC 8955 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | |||| |||||||||||||||||||| |||||||| || || ||| Sbjct 8956 GACACCATCCAAGCCGTCAAGCAAAAAATTCAAGACAAGGAAGGTATTCCCCCTGACCAA 9015 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | ||||| ||||| | |||||||||||| Sbjct 9016 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9075 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || || ||||| | || || ||| Sbjct 9076 ATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGT 9123 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | ||||| || || ||||||| ||||| || | || Sbjct 8668 ATGCAAATTTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGTCTTCC 8727 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | ||||| || |||||||||||||| ||||| || || || ||| Sbjct 8728 GACACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATCCCCCCTGACCAA 8787 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || |||||||| ||| | ||||| ||||| | |||||||||||| Sbjct 8788 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 8847 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || || ||||| | || || ||| Sbjct 8848 ATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGT 8895 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | |||||||| || ||||||| ||||| || || || Sbjct 9124 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAGACTATCACTCTCGAAGTTGAGTCCTCC 9183 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | | | | ||||| || |||||||||||||| ||||| || || || ||| Sbjct 9184 GATACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATCCCCCCTGACCAA 9243 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | ||||| ||||| | |||||||||||| Sbjct 9244 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 9303 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || || ||||| | || || ||| Sbjct 9304 ATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGT 9351 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || |||||||| || || || || | || || || || || | | Sbjct 7212 ATGCAGATTTTCGTAAAAACTTTGACGGGAAAGACAATTACCCTGGAGGTCGAGTCTTCT 7271 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | |||| |||||||||||||||||||| |||||||| || || ||| Sbjct 7272 GACACCATCCAAGCCGTCAAGCAAAAAATTCAAGACAAGGAAGGTATTCCCCCTGACCAA 7331 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | ||||| ||||| | |||||||||||| Sbjct 7332 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 7391 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 7392 ATCCAGAAGGAATCTAC 7408 >seq2282 Length=5406 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| |||||||| || || || || | || ||||| || || || || Sbjct 393 ATGCAGATCTTTGTAAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCCTCC 334 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | ||||| ||||| ||||||||||| ||||| || || || ||| Sbjct 333 GACACCATCCAAGCCGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 274 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | |||||| ||||| | |||||||||||| Sbjct 273 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 214 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || ||||| | || || ||| Sbjct 213 ATCCAAAAGGAATCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGT 166 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||||| || || || ||| ||||||| ||||| || | || Sbjct 165 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACGATCACTCTCGAAGTCGAGTCTTCC 106 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | | ||||| ||||| ||||||||||| ||||| || || || ||| Sbjct 105 GACACCATCCAAGCTGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 46 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373 ||||| | || || |||||||| ||| | ||||| Sbjct 45 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGA 11 >seq1860 Length=4765 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||||| || || || || | || ||||| || || || || Sbjct 1729 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 1670 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | | | | | || || ||||| ||||||||||| || || || || || ||| Sbjct 1669 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 1610 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | |||||| ||||| | |||||||||||| Sbjct 1609 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 1550 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || ||||| ||||| || | || || || ||||| Sbjct 1549 ATCCAAAAGGAATCTACTCTCCACTTGGTCTTGCG 1515 Score = 131 bits (144), Expect = 1e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || |||||||| || || |||||||| || || || || | || ||||| || || || Sbjct 2644 AACATGCAAATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCC 2585 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||||||| | | | | | || || ||||| ||||||||||| || || || || || Sbjct 2584 TCCGATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGAC 2525 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||||| | || || || ||||| ||| | |||||| ||||| | ||||||||| Sbjct 2524 CAACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTAC 2465 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| ||||| ||||| || Sbjct 2464 AACATCCAAAAGGAATCTAC 2445 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||||| || || || || | || ||||| || || || || Sbjct 2185 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACTATTACCCTTGAGGTCGAGTCCTCC 2126 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | | || ||||| |||||||||||||| || || || || || ||| Sbjct 2125 GACACCATCCAAGCTGTGAAGCAAAAGATTCAAGACAAGGAAGGGATCCCTCCTGACCAA 2066 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || ||||| || || || || || ||| ||| | |||||||||||| Sbjct 2065 CAACGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGCCGGACCCTTTCCGATTACAAC 2006 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||||| || | || ||||| ||||| | || || ||| Sbjct 2005 ATCCAGAAGGAATCTACTCTCCACTTAGTCTTGCGCCTTCGTGGTGGT 1958 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||||| || || || || | || ||||| || || || || Sbjct 1957 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 1898 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | | | | | || || ||||| ||||||||||| || || || || || ||| Sbjct 1897 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 1838 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | |||||| ||||| | |||||||||||| Sbjct 1837 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 1778 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| ||||| || Sbjct 1777 ATCCAAAAGGAATCTAC 1761 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||||| || || || || | || ||||| || || || || Sbjct 2413 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 2354 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | | | | | || || ||||| ||||||||||| || || || || || ||| Sbjct 2353 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGCATCCCCCCTGACCAA 2294 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | |||||| ||||| | |||||||||||| Sbjct 2293 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 2234 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| ||||| || Sbjct 2233 ATCCAAAAGGAATCTAC 2217 >seq5736 Length=2708 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || ||||| | || || || || ||||||| ||||| || || || Sbjct 2234 ATGCAAATCTTCGTCAAAACCCTCACAGGAAAGACTATCACTCTCGAAGTCGAGTCCTCC 2293 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | || || ||||| ||||||||||| |||||||| || || ||| Sbjct 2294 GACACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAAGGTATTCCCCCTGACCAA 2353 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || ||||| || ||| | |||||| ||||| | |||||||||||| Sbjct 2354 CAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 2413 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || || ||||| | || || ||| Sbjct 2414 ATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGT 2461 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || ||||||| ||||| || || || Sbjct 2462 ATGCAGATCTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTTGAGTCCTCC 2521 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | | | | || || ||||| ||||||||||| ||||| || || || ||| Sbjct 2522 GATACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 2581 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || ||||| || ||| | |||||| ||||| | |||||||||||| Sbjct 2582 CAACGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACTCTTTCCGATTACAAC 2641 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || || ||||| | || || ||| Sbjct 2642 ATCCAGAAGGAGTCTACTCTCCACTTGGTCTTGCGCCTTCGTGGTGGT 2689 >seq147 Length=786 Score = 116 bits (128), Expect = 3e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | ||||| || || ||||||| ||||| || | || Sbjct 184 ATGCAAATTTTCGTCAAGACCCTCACCGGGAAGACTATCACTCTCGAAGTCGAGTCTTCC 125 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | ||||| || |||||||||||||| |||||||| || || ||| Sbjct 124 GACACCATCCAAGCCGTGAAACAGAAGATTCAAGACAAGGAAGGTATTCCCCCTGACCAA 65 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | ||||| ||||| | |||||||||||| Sbjct 64 CAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGATTACAAC 5 Query 22399 AT 22400 || Sbjct 4 AT 3 >seq247 Length=13334 Score = 111 bits (122), Expect = 1e-19 Identities = 132/178 (74%), Gaps = 6/178 (3%) Strand=Plus/Plus Query 22256 TCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACA 22315 |||||||||| || || ||||||| | | | | | ||||| || |||||||||| Sbjct 9869 TCACTCTTGAGGT-----CCTCCGATACTATCCAAGCTGTGAAACATAAGATTCAAGACA 9923 Query 22316 AGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATC 22375 ||||||| || | || || |||||| | ||||| |||| || || ||| | |||||| Sbjct 9924 AGGAGGGAATCTCCCCTGACCAACAATGCCTTATCTTTGTTGGAAAGCAGCTCGAGGATG 9983 Query 22376 ACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||||| |||||||| |||||| || ||||| ||| || | || || || ||||| Sbjct 9984 ACCGCACTCTCTCCGATGACAACA-TCCAAAAGGATCTACTCTCCACTTGGTCTTGCG 10040 >seq1292 Length=4421 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||||| || || || || | || ||||| || || | | Sbjct 57 ATGCAGATCTTCGTAAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCTTCT 116 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | || || ||||| |||||||||||||| || || || || ||| Sbjct 117 GACACCATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAA 176 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || ||||| || || || || || ||||| | |||||||||||| Sbjct 177 CAACGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGTCGCACTCTTTCCGATTACAAC 236 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||| || | || || || ||||| | || ||||| Sbjct 237 ATCCAGAAGGAATCTACTCTTCACTTGGTCTTGCGCCTTCGTGGAGG 283 >seq7632 Length=1044 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||||| || || || || | || ||||| || || | | Sbjct 898 ATGCAGATCTTCGTGAAAACTTTGACGGGAAAGACAATTACCCTTGAGGTCGAGTCTTCT 839 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | | | | || || ||||| |||||||||||||| || || || || ||| Sbjct 838 GACACTATCCAAGCCGTGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCCCCTGACCAA 779 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || ||||| || || || || || ||||| | |||||||||||| Sbjct 778 CAACGATTGATCTTCGCCGGAAAGCAATTGGAAGACGGTCGCACTCTTTCCGATTACAAC 719 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||||| || | || || || ||||| | || ||||| Sbjct 718 ATCCAGAAGGAATCTACTCTTCACTTGGTCTTGCGCCTTCGTGGAGG 672 >seq1953 Length=6420 Score = 98.7 bits (108), Expect = 8e-16 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || ||||| | |||||||| || ||||||| ||||| || || || Sbjct 1101 ATGCAAATCTTCGTCAAAACCCTCACCGGTAAGACTATCACTCTCGAAGTCGAGTCCTCC 1042 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | | | | | || || ||||| ||||||||||| |||||||| || || ||| Sbjct 1041 GATACCATCCAAGCTGTGAAGCAGAAAATCCAAGACAAGGAAGGTATTCCCCCTGACCAA 982 Query 22339 CAACGTC 22345 |||| || Sbjct 981 CAACTTC 975 >seq1516 Length=4393 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || |||||||| || || || || |||| ||||| || || || || Sbjct 2288 ATGCAAATCTTCGTAAAAACTTTGACGGGAAAGACAATCACCCTTGAGGTCGAGTCCTCC 2347 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | | | | ||||| ||||| ||||||||||| ||||| || || || ||| Sbjct 2348 GACACCATCCAAGCCGTGAAACAGAAAATCCAAGACAAGGAAGGTATCCCCCCTGACCAA 2407 Query 22339 CAACG 22343 ||||| Sbjct 2408 CAACG 2412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419680278106885