Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramoeba_20pemaquidensis_20[genbank_20GCA_5F002151225.1_202017-05- 19] 9,329 sequences; 34,386,983 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq7817 89.7 5e-13 >seq7817 Length=11892 Score = 89.7 bits (98), Expect = 5e-13 Identities = 226/344 (66%), Gaps = 0/344 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 |||||| ||| ||||||| | ||| || | ||||| |||||||| || || Sbjct 4388 AGACCACAAACTTGAGCAATGAGCCGAGTCAACAAAGAATACGAAGCAATGTTGAAGGGG 4329 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || || | ||||| || | |||| || |||| | || || | || || | | Sbjct 4328 ACCCCAAGGCCCATATCACAGGACCGTTGGTACATCAAGCACGACAATTCTCCATTCGAA 4269 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 ||| | || || || |||| |||||| || ||||| ||||| | | ||| |||| Sbjct 4268 ACAAAGAACTGGCAAAACATGTGACATGGGGGAAGTGCCATTTCTGGGATCGCCGACGGG 4209 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||||||| |||| ||||| | || ||| ||| || || || || || | | Sbjct 4208 TTCCACGCAGACATGATGATACGTCGATCTGTCGGGTTGTTCTTGATCTTTTCGATTACT 4149 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCC 20536 | || || ||||| | || || || || ||||| |||| | || |||| ||| Sbjct 4148 TGCGCCAGCTGGTCCACGCCTTGTCCAGTGTAGTCGGCATGCATATCAGTGTACTTTGCC 4089 Query 20537 CCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||||||| | |||||| || || || | || |||| ||||| Sbjct 4088 CCAAAGTGGCGCCACTGAAATCCATAGATCGGGCCCAGGTCCCC 4045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441321330414360